Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_F01
         (728 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein p...    44   1e-06
DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.           42   5e-06
DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protei...    29   0.034
AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly pro...    27   0.14 
DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly pro...    27   0.18 
D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.         24   1.3  
AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly pro...    24   1.3  
AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly pro...    24   1.3  
AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly pro...    22   5.2  
Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein RJP...    22   6.8  
AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly pro...    22   6.8  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   6.8  
EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate isome...    21   9.0  

>DQ257415-1|ABB81846.1|  430|Apis mellifera yellow-like protein
           protein.
          Length = 430

 Score = 44.0 bits (99), Expect = 1e-06
 Identities = 18/39 (46%), Positives = 27/39 (69%)
 Frame = -2

Query: 727 WILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           WI+ D++P FL  TL+  +V + I ++  +DAIAGT CE
Sbjct: 376 WIISDRMPVFLLXTLNYTDVXFRILTMPVRDAIAGTICE 414


>DQ257416-1|ABB81847.1|  552|Apis mellifera yellow-h protein.
          Length = 552

 Score = 42.3 bits (95), Expect = 5e-06
 Identities = 14/39 (35%), Positives = 27/39 (69%)
 Frame = -2

Query: 727 WILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           W+L +KL  +LY ++D +++NY I+  + K+A+  T C+
Sbjct: 498 WVLSNKLAMYLYGSIDSSKINYRIFKANVKEAVKDTXCD 536


>DQ257631-1|ABB82366.1|  424|Apis mellifera yellow e3-like protein
           protein.
          Length = 424

 Score = 29.5 bits (63), Expect = 0.034
 Identities = 11/39 (28%), Positives = 20/39 (51%)
 Frame = -2

Query: 727 WILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           WI      +++  TL+ NE N+ I +    + + GT C+
Sbjct: 375 WIFTISFQKYMSGTLNSNETNFRIQAGLVDELVRGTKCD 413


>AF004842-1|AAD01205.1|  598|Apis mellifera major royal jelly
           protein MRJP5 protein.
          Length = 598

 Score = 27.5 bits (58), Expect = 0.14
 Identities = 12/33 (36%), Positives = 17/33 (51%)
 Frame = -2

Query: 712 KLPRFLYKTLDPNEVNYSIYSISAKDAIAGTAC 614
           KL +F+    + NEVN+ I   +  D I  T C
Sbjct: 551 KLQKFINNDYNFNEVNFRILGANVNDLIMNTRC 583


>DQ000307-1|AAY21180.1|  423|Apis mellifera major royal jelly
           protein 9 protein.
          Length = 423

 Score = 27.1 bits (57), Expect = 0.18
 Identities = 13/39 (33%), Positives = 19/39 (48%)
 Frame = -2

Query: 727 WILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           WI+ +K  +     L+ NEVN+ I +      I  T CE
Sbjct: 374 WIVSNKYQKIANGDLNFNEVNFRILNAPVNQLIRYTRCE 412


>D79207-1|BAA23639.1|  432|Apis mellifera milk protein protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -2

Query: 724 ILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           +L +K+ + +    + ++VN+ I + +  + I  T CE
Sbjct: 380 VLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCE 417


>AF388203-1|AAM73637.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -2

Query: 724 ILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           +L +K+ + +    + ++VN+ I + +  + I  T CE
Sbjct: 380 VLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCE 417


>AF000633-1|AAC61895.1|  432|Apis mellifera major royal jelly
           protein MRJP1 protein.
          Length = 432

 Score = 24.2 bits (50), Expect = 1.3
 Identities = 9/38 (23%), Positives = 21/38 (55%)
 Frame = -2

Query: 724 ILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTACE 611
           +L +K+ + +    + ++VN+ I + +  + I  T CE
Sbjct: 380 VLSNKMQKMVNNDFNFDDVNFRIMNANVNELILNTRCE 417


>AY398690-1|AAR83734.1|  416|Apis mellifera major royal jelly
           protein 8 protein.
          Length = 416

 Score = 22.2 bits (45), Expect = 5.2
 Identities = 10/34 (29%), Positives = 18/34 (52%)
 Frame = -2

Query: 715 DKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTAC 614
           +++ + +Y   D N+VN+ I   +  D I  T C
Sbjct: 381 NRIQKVIYG-FDFNDVNFRILIANVNDLIKNTRC 413


>Z26318-1|CAA81227.1|  544|Apis mellifera royal jelly protein
           RJP57-1 protein.
          Length = 544

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/36 (22%), Positives = 18/36 (50%)
 Frame = -2

Query: 721 LVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTAC 614
           L +++ + +    + N+VN+ I   +  D +  T C
Sbjct: 384 LSNRMQKIINNDFNFNDVNFRILGANVDDLMRNTRC 419


>AF000632-1|AAC61894.1|  452|Apis mellifera major royal jelly
           protein MRJP2 protein.
          Length = 452

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 8/37 (21%), Positives = 20/37 (54%)
 Frame = -2

Query: 724 ILVDKLPRFLYKTLDPNEVNYSIYSISAKDAIAGTAC 614
           +L +++ + +    + ++VN+ I   + K+ I  T C
Sbjct: 378 VLSNRMQKIVNDDFNFDDVNFRILGANVKELIRNTHC 414


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.8 bits (44), Expect = 6.8
 Identities = 7/12 (58%), Positives = 9/12 (75%)
 Frame = +2

Query: 431 INSVRGHXGIYH 466
           +NS+R H  IYH
Sbjct: 45  LNSLRNHKSIYH 56


>EF493864-1|ABP65286.1|  247|Apis mellifera triosephoshpate
           isomerase protein.
          Length = 247

 Score = 21.4 bits (43), Expect = 9.0
 Identities = 8/22 (36%), Positives = 13/22 (59%)
 Frame = +1

Query: 274 YFCHKKSITHNNLLLLSKNTIK 339
           Y  + K+I  NN+ +  +NT K
Sbjct: 46  YLTYAKNILPNNISIAGQNTYK 67


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 173,313
Number of Sequences: 438
Number of extensions: 3449
Number of successful extensions: 17
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 56
effective length of database: 121,815
effective search space used: 22657590
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)