Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_E24
         (512 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical pr...    34   0.052
AF248052-1|AAF62184.1|  280|Caenorhabditis elegans MEI-2 protein.      30   1.1  
AF039713-9|AAB96729.1|  280|Caenorhabditis elegans Defective mei...    30   1.1  
AC024201-18|AAF36026.1|  430|Caenorhabditis elegans Hypothetical...    29   2.0  
U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon gu...    28   3.4  
U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon gu...    28   3.4  
AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFO...    28   3.4  
U40421-2|AAA81438.1|  453|Caenorhabditis elegans Hypothetical pr...    27   6.0  
AL033510-3|CAA22066.1|  323|Caenorhabditis elegans Hypothetical ...    27   7.9  

>U10401-1|AAA19058.1|  131|Caenorhabditis elegans Hypothetical
           protein T20B12.5 protein.
          Length = 131

 Score = 34.3 bits (75), Expect = 0.052
 Identities = 15/41 (36%), Positives = 26/41 (63%)
 Frame = +3

Query: 84  FDESENFFEYKL*LFNFLLHSQNIFNNYLQKY*LNFRYIAS 206
           F  +  F ++K+ +   L H+QNIFN+ L+KY   F+Y ++
Sbjct: 68  FFYNSRFLQFKVSIRCPLFHAQNIFNSKLEKYECTFKYYSN 108


>AF248052-1|AAF62184.1|  280|Caenorhabditis elegans MEI-2 protein.
          Length = 280

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -3

Query: 213 ALKKQCIESSINIFVNNY*KYSGCEVEN*KVTICIQ---RNFQIHRMK 79
           +L K   ESS+++  +N   +S C  E  K+ +C +   RN ++++MK
Sbjct: 94  SLPKSSPESSVSVMSSNASLWSACTEEVNKIGVCAKRESRNLRVYKMK 141


>AF039713-9|AAB96729.1|  280|Caenorhabditis elegans Defective
           meiosis protein 2 protein.
          Length = 280

 Score = 29.9 bits (64), Expect = 1.1
 Identities = 15/48 (31%), Positives = 28/48 (58%), Gaps = 3/48 (6%)
 Frame = -3

Query: 213 ALKKQCIESSINIFVNNY*KYSGCEVEN*KVTICIQ---RNFQIHRMK 79
           +L K   ESS+++  +N   +S C  E  K+ +C +   RN ++++MK
Sbjct: 94  SLPKSSPESSVSVMSSNASLWSACTEEVNKIGVCAKRESRNLRVYKMK 141


>AC024201-18|AAF36026.1|  430|Caenorhabditis elegans Hypothetical
           protein Y71F9B.14 protein.
          Length = 430

 Score = 29.1 bits (62), Expect = 2.0
 Identities = 15/42 (35%), Positives = 23/42 (54%)
 Frame = +1

Query: 277 QK*IYTFLTIYFN*IYYKCDLQNVSCYLLKINNLIHFIIFVS 402
           +K IYT  T Y+N     CDL   S + ++ +   H IIF++
Sbjct: 55  KKDIYTSTTEYYNGKIVDCDLPKTSLFCVETDPDAHGIIFLN 96


>U50067-4|AAA93439.3| 1144|Caenorhabditis elegans Sensory axon
           guidance protein 7,isoform a protein.
          Length = 1144

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 385 NESNYLFLISSSLHF-ADRIYNIFS*NISLKTYKF 284
           N + ++FL+   L   +DR Y   + NI LK YKF
Sbjct: 14  NTTTFIFLLGCLLFLVSDRYYTCTAENIELKDYKF 48


>U50067-3|AAZ32801.1| 1147|Caenorhabditis elegans Sensory axon
           guidance protein 7,isoform d protein.
          Length = 1147

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 385 NESNYLFLISSSLHF-ADRIYNIFS*NISLKTYKF 284
           N + ++FL+   L   +DR Y   + NI LK YKF
Sbjct: 14  NTTTFIFLLGCLLFLVSDRYYTCTAENIELKDYKF 48


>AB206670-1|BAD97389.1| 1147|Caenorhabditis elegans SAX-7 SHORTFORM
           protein.
          Length = 1147

 Score = 28.3 bits (60), Expect = 3.4
 Identities = 14/35 (40%), Positives = 20/35 (57%), Gaps = 1/35 (2%)
 Frame = -2

Query: 385 NESNYLFLISSSLHF-ADRIYNIFS*NISLKTYKF 284
           N + ++FL+   L   +DR Y   + NI LK YKF
Sbjct: 14  NTTTFIFLLGCLLFLVSDRYYTCTAENIELKDYKF 48


>U40421-2|AAA81438.1|  453|Caenorhabditis elegans Hypothetical
           protein C02B8.5 protein.
          Length = 453

 Score = 27.5 bits (58), Expect = 6.0
 Identities = 9/16 (56%), Positives = 14/16 (87%)
 Frame = +1

Query: 91  NLKISLNTNCNFLIFY 138
           NL + +N++CNFLI+Y
Sbjct: 181 NLMVVVNSSCNFLIYY 196


>AL033510-3|CAA22066.1|  323|Caenorhabditis elegans Hypothetical
           protein Y40H7A.5 protein.
          Length = 323

 Score = 27.1 bits (57), Expect = 7.9
 Identities = 14/41 (34%), Positives = 22/41 (53%), Gaps = 6/41 (14%)
 Frame = +1

Query: 346 VSCYLLKINNL------IHFIIFVSYLLATPDVIYMXSWPK 450
           ++CYL +   L      I  IIF ++L+ TP  ++M  W K
Sbjct: 106 IACYLFRYYILYVCDPSIKSIIFAAFLVYTPSFVHMAMWIK 146


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,151,855
Number of Sequences: 27780
Number of extensions: 164953
Number of successful extensions: 363
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 358
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 363
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 985905834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)