BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_E19
(569 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF338109-1|AAK84085.1| 123|Homo sapiens proapoptotic caspase ad... 35 0.18
>AF338109-1|AAK84085.1| 123|Homo sapiens proapoptotic caspase
adaptor protein protein.
Length = 123
Score = 35.1 bits (77), Expect = 0.18
Identities = 19/56 (33%), Positives = 28/56 (50%)
Frame = -3
Query: 207 GKLKKQLEYKNVFGVSRTNQSGTHNCPAAEIAGVLVLTGIRSVRSTPQRFYSGHEP 40
GK + Q Y ++G + + G H CP E+ + L G+RS RS P + H P
Sbjct: 70 GKGRDQTSYLKLWGAAGAERVGLHGCPGPEL--LPELAGLRSSRSGPSE--TSHRP 121
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 74,790,764
Number of Sequences: 237096
Number of extensions: 1453692
Number of successful extensions: 2416
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 2385
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2416
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5816287018
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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