Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_E17
         (721 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical pr...    32   0.36 
Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical pr...    29   2.5  
Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical pr...    28   5.8  
AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical ...    28   5.8  

>Z66495-1|CAA91268.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.1 protein.
          Length = 502

 Score = 32.3 bits (70), Expect = 0.36
 Identities = 16/68 (23%), Positives = 32/68 (47%)
 Frame = -3

Query: 560 DYECRKVRTHLIFV*SKLVSSTVRRRHVATVPIGLVVAPRVVWSAARYSYTPVTNTLPPV 381
           D  C++ R  + +V +K   S +  RH   +   +++     +  A Y YTP+ +   P+
Sbjct: 200 DSNCQRDRNDVFYVNAKKYISNIDIRHSKIIAASVLLPELSTFWKALYKYTPLADAEIPL 259

Query: 380 FDPVFNYY 357
            + + N Y
Sbjct: 260 VEGLSNVY 267


>Z66495-2|CAA91267.2|  502|Caenorhabditis elegans Hypothetical
           protein C36A4.2 protein.
          Length = 502

 Score = 29.5 bits (63), Expect = 2.5
 Identities = 14/68 (20%), Positives = 30/68 (44%)
 Frame = -3

Query: 560 DYECRKVRTHLIFV*SKLVSSTVRRRHVATVPIGLVVAPRVVWSAARYSYTPVTNTLPPV 381
           D  C++ R  + +V ++   + +  RH   +    ++        A Y YTP+ +   P+
Sbjct: 200 DSNCQRDRNDVFYVNARKFIANIDIRHSKVIAASFILPELAPLWRALYKYTPLADAEIPL 259

Query: 380 FDPVFNYY 357
            + + N Y
Sbjct: 260 VEGLSNVY 267


>Z81069-8|CAB02996.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 158 YILRNNASSVPGRSNVKFVLSGYVRCCF--PYLF 63
           Y +++N S +P  SNV   LS   RCC   P++F
Sbjct: 105 YSIKHNLSRLPFLSNVTQYLSKIFRCCVIKPFVF 138


>AL021448-4|CAA16278.2|  600|Caenorhabditis elegans Hypothetical
           protein Y2H9A.4 protein.
          Length = 600

 Score = 28.3 bits (60), Expect = 5.8
 Identities = 14/34 (41%), Positives = 20/34 (58%), Gaps = 2/34 (5%)
 Frame = -3

Query: 158 YILRNNASSVPGRSNVKFVLSGYVRCCF--PYLF 63
           Y +++N S +P  SNV   LS   RCC   P++F
Sbjct: 105 YSIKHNLSRLPFLSNVTQYLSKIFRCCVIKPFVF 138


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,588,095
Number of Sequences: 27780
Number of extensions: 293704
Number of successful extensions: 790
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 767
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 790
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1687292480
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)