Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_E16
(681 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical pr... 34 0.11
Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical pr... 32 0.33
Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical pr... 32 0.44
AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein. 32 0.44
Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical pr... 31 1.0
Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical pr... 30 1.3
AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical ... 29 2.3
U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical p... 29 3.1
Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical pr... 28 5.4
Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical pr... 27 9.4
>Z81044-5|CAE17706.2| 460|Caenorhabditis elegans Hypothetical
protein C30H6.11 protein.
Length = 460
Score = 33.9 bits (74), Expect = 0.11
Identities = 28/95 (29%), Positives = 38/95 (40%), Gaps = 2/95 (2%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIA--RXTXTPRALXMPTTTLALSIITGQSTTC 476
T T + TTT ++P P T T + T TP P TT + + T +TT
Sbjct: 204 TTTTTTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTTTTPTTTT 263
Query: 475 QDACDVELIPSTPTRHGRTISTGWLPSTGCTHLAT 371
Q +TPT T +T P+T T T
Sbjct: 264 QTTTKPTTTTTTPTTTPTTTTT---PTTTTTTAKT 295
Score = 30.7 bits (66), Expect = 1.0
Identities = 28/101 (27%), Positives = 37/101 (36%), Gaps = 4/101 (3%)
Frame = -3
Query: 661 SCRXTLTPSRFTTTLSLPLRGLRYPXTVTC--LSIARXTXTP--RALXMPTTTLALSIIT 494
S T TP+ TTT + P P T T + T TP PTTT + T
Sbjct: 71 STTTTTTPTTPTTTTTTPTTTTTTPTTTTTTPTTTTETTTTPTTETTTTPTTTTPTTTTT 130
Query: 493 GQSTTCQDACDVELIPSTPTRHGRTISTGWLPSTGCTHLAT 371
+TT + +T T T +T +T T T
Sbjct: 131 TPTTTTTETTTTPTTTTTETTTTPTTTTTTPTTTTTTPTTT 171
Score = 29.5 bits (63), Expect = 2.3
Identities = 25/95 (26%), Positives = 33/95 (34%), Gaps = 2/95 (2%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLAL--SIITGQSTTC 476
T T + TTT + P P T T T PTTT + T +TT
Sbjct: 162 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTTTVPTTTT 221
Query: 475 QDACDVELIPSTPTRHGRTISTGWLPSTGCTHLAT 371
+TPT T +T P+T + T
Sbjct: 222 TTPTTTTTTTTTPTTTTTTPTTTTTPATTTSETTT 256
Score = 28.3 bits (60), Expect = 5.4
Identities = 22/77 (28%), Positives = 28/77 (36%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLALSIITGQSTTCQD 470
T T TTT + + P T T T TP PTTT + T +TT
Sbjct: 249 TTTSETTTTTPTTTTQTTTKPTTTT----TTPTTTPTTTTTPTTTTTTAKTTKSTTTTTK 304
Query: 469 ACDVELIPSTPTRHGRT 419
P+T T +T
Sbjct: 305 TTKTTSTPTTTTTTPKT 321
Score = 27.9 bits (59), Expect = 7.1
Identities = 25/95 (26%), Positives = 32/95 (33%), Gaps = 2/95 (2%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLAL--SIITGQSTTC 476
T T + TTT + P P T T T PTTT + T +TT
Sbjct: 148 TETTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTT 207
Query: 475 QDACDVELIPSTPTRHGRTISTGWLPSTGCTHLAT 371
+P+T T T +T T T T
Sbjct: 208 TTPTTTTTVPTTTTTTPTTTTTTTTTPTTTTTTPT 242
Score = 27.5 bits (58), Expect = 9.4
Identities = 27/98 (27%), Positives = 34/98 (34%), Gaps = 3/98 (3%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLA--LSIITGQSTTC 476
T T + TTT + P P T T T PTTT + T +TT
Sbjct: 155 TTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTTPTTTTTAPTTTTTTPTTTTTTPTTTT 214
Query: 475 QDACDVELIPSTPTRHGRT-ISTGWLPSTGCTHLATDS 365
P+T T T +T P+T T T S
Sbjct: 215 TVPTTTTTTPTTTTTTTTTPTTTTTTPTTTTTPATTTS 252
>Z81528-4|CAB04281.1| 575|Caenorhabditis elegans Hypothetical
protein F35E2.5 protein.
Length = 575
Score = 32.3 bits (70), Expect = 0.33
Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 4/99 (4%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLALSIITGQSTTCQD 470
T + ++ TTT S R L T L+ TP +PTT+LAL T + T
Sbjct: 328 TRSTTKRTTTRSTTKR-LTTTKATTVLTTTPVKVTPATTTLPTTSLALETTTTATRTTAK 386
Query: 469 ACDVELIPSTPTRHGRTI----STGWLPSTGCTHLATDS 365
V + T T T ST LP+T + +T+S
Sbjct: 387 ITAVATVARTNTTQPPTTTPLSSTTALPTTLTSSSSTES 425
>Z75545-1|CAB61025.1| 665|Caenorhabditis elegans Hypothetical
protein K10D3.2 protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -3
Query: 640 PSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTT--LALSIITGQSTTCQ-D 470
P+R +T P R R P + + +SI+ T TPR+ P+TT + ++ I G T
Sbjct: 567 PARLSTA---PSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRVASIMGDFTLANFS 623
Query: 469 ACDVELIPSTPTRHG 425
D E + TR G
Sbjct: 624 LSDGEKVSVLSTRGG 638
>AB000913-1|BAA21715.1| 665|Caenorhabditis elegans UNC-14 protein.
Length = 665
Score = 31.9 bits (69), Expect = 0.44
Identities = 24/75 (32%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Frame = -3
Query: 640 PSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTT--LALSIITGQSTTCQ-D 470
P+R +T P R R P + + +SI+ T TPR+ P+TT + ++ I G T
Sbjct: 567 PARLSTA---PSRRSRIPLSTSRISISSTTSTPRSARSPSTTSRIRVASIMGDFTLANFS 623
Query: 469 ACDVELIPSTPTRHG 425
D E + TR G
Sbjct: 624 LSDGEKVSVLSTRGG 638
>Z82288-5|CAB05324.1| 380|Caenorhabditis elegans Hypothetical
protein ZK896.7 protein.
Length = 380
Score = 30.7 bits (66), Expect = 1.0
Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 1/74 (1%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLALSIITG-QSTTCQ 473
T T S TT+ R P T T + T T PTTT++ + T TT
Sbjct: 149 TATTSAAPTTIPPTTTTTRAPTTTTVRKTTQTTATTMTTPKPTTTVSTTTTTTVPPTTTP 208
Query: 472 DACDVELIPSTPTR 431
AC + PT+
Sbjct: 209 KACPQGFVLFEPTQ 222
>Z68314-7|CAA92662.2| 872|Caenorhabditis elegans Hypothetical
protein F07H5.8 protein.
Length = 872
Score = 30.7 bits (66), Expect = 1.0
Identities = 20/91 (21%), Positives = 41/91 (45%), Gaps = 5/91 (5%)
Frame = -3
Query: 667 PNSCRXTLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLALSIITGQ 488
P+ C+ T +P + ++++ ++ P T +C+ + TP+ + TTT + I
Sbjct: 268 PSQCQPTCSP-QCIQSVTVSIQTTAQPTTASCIPACQPACTPQCVQAVTTT--ETCIPAC 324
Query: 487 STTCQDAC-----DVELIPSTPTRHGRTIST 410
CQ C ++++ S T+ R T
Sbjct: 325 QPACQPQCVERQLQIQIVTSQATQATRAPET 355
>Z81520-4|CAE17808.1| 181|Caenorhabditis elegans Hypothetical
protein F31B9.4 protein.
Length = 181
Score = 30.3 bits (65), Expect = 1.3
Identities = 22/82 (26%), Positives = 32/82 (39%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLALSIITGQSTTCQD 470
T+ P+ TTT + P + T T +IA T T + TTT ++ T D
Sbjct: 22 TIRPNSTTTTTTSPAPNIT--TTTTTTTIAPPTNTTTTIL--TTTTTVTTTTTSPPLIPD 77
Query: 469 ACDVELIPSTPTRHGRTISTGW 404
C IP R + + W
Sbjct: 78 GCCGYPIPDVGVNSARPVRSDW 99
>AC024785-3|AAF60597.2| 456|Caenorhabditis elegans Hypothetical
protein Y46C8AL.2 protein.
Length = 456
Score = 29.5 bits (63), Expect = 2.3
Identities = 26/93 (27%), Positives = 37/93 (39%), Gaps = 2/93 (2%)
Frame = -3
Query: 643 TPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXT-PRALXM-PTTTLALSIITGQSTTCQD 470
TPS +T + P P T T + T T P + PTT + + TT
Sbjct: 154 TPSTMKSTPTTPTTIKSTPTTPTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKSTPTTPTT 213
Query: 469 ACDVELIPSTPTRHGRTISTGWLPSTGCTHLAT 371
++ P+TPT ST P+T T +T
Sbjct: 214 PTTMKSTPTTPTTPTTMKSTPTTPTTPTTMKST 246
>U41263-13|AAC24428.2| 1844|Caenorhabditis elegans Hypothetical
protein T19D12.1 protein.
Length = 1844
Score = 29.1 bits (62), Expect = 3.1
Identities = 28/97 (28%), Positives = 36/97 (37%), Gaps = 2/97 (2%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSI--ARXTXTPRALXMPTTTLALSIITGQSTTC 476
T PS TTT + + T + A T P T + S +TT
Sbjct: 267 TTAPSTNTTTQGVTTTVGKTTTVTTAQNSTWAATTTASNTTTQPVVTTSTSTQGISTTTA 326
Query: 475 QDACDVELIPSTPTRHGRTISTGWLPSTGCTHLATDS 365
Q +IP+T R STG +PST T T S
Sbjct: 327 QATPSSSVIPTTTQTTQRPTSTG-IPSTVSTSQGTSS 362
>Z83235-1|CAB05775.1| 174|Caenorhabditis elegans Hypothetical
protein K10C3.2 protein.
Length = 174
Score = 28.3 bits (60), Expect = 5.4
Identities = 21/74 (28%), Positives = 30/74 (40%)
Frame = -1
Query: 582 PLPACPSRDXRXLPAPYXCPQLPSLSRLLQANLPRAKTRATWS*SLRRPQGMAGPSRQAG 403
P PA P + PAP PS S + Q + R + +L+ P+ P R+A
Sbjct: 86 PPPAAPPVVAQRSPAPAATTPSPSASPISQQTNRPSSDRNSDDDNLQIPRPDTVPQRKAS 145
Query: 402 CHRPAVPISLRTLP 361
P+V L P
Sbjct: 146 IINPSVHCKLSPAP 159
>Z81587-6|CAB04704.1| 417|Caenorhabditis elegans Hypothetical
protein T06G6.8 protein.
Length = 417
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/62 (32%), Positives = 23/62 (37%), Gaps = 1/62 (1%)
Frame = -1
Query: 537 PYXCPQLPSLSR-LLQANLPRAKTRATWS*SLRRPQGMAGPSRQAGCHRPAVPISLRTLP 361
P P PS +R L + AK T S + PQ PS A P L T P
Sbjct: 233 PSDLPTKPSRTRSLTSTSTTTAKLPTTTSTTFAAPQASTEPSEATEALATATPADLPTKP 292
Query: 360 KG 355
G
Sbjct: 293 SG 294
>Z72504-5|CAA96602.2| 812|Caenorhabditis elegans Hypothetical
protein C29E6.1a protein.
Length = 812
Score = 28.3 bits (60), Expect = 5.4
Identities = 20/73 (27%), Positives = 31/73 (42%)
Frame = -3
Query: 649 TLTPSRFTTTLSLPLRGLRYPXTVTCLSIARXTXTPRALXMPTTTLALSIITGQSTTCQD 470
T + + TTT + + + P T T S T T + PTT+ + + T STT
Sbjct: 386 TTSTKKLTTTTTTTPKPSQKPTTTTTKSPVVITTTTKTSPKPTTSPSTTTSTTTSTTIPP 445
Query: 469 ACDVELIPSTPTR 431
+ P+ P R
Sbjct: 446 STTTRK-PANPRR 457
>Z74036-3|CAA98488.1| 517|Caenorhabditis elegans Hypothetical
protein F55C10.4 protein.
Length = 517
Score = 27.5 bits (58), Expect = 9.4
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = -2
Query: 506 LDYYRPIYHVPRRVRRGVDPFDAHKAWQDHLDRLAAIDRLYPSRYGLYL 360
+ Y +PIY P+ V V P A + WQ L +L + + Y + LY+
Sbjct: 145 IPYKKPIYIAPKPVIFCVSPQFAAEQWQTFLVQL-HVSKRYGAHLQLYI 192
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,929,690
Number of Sequences: 27780
Number of extensions: 250777
Number of successful extensions: 833
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 732
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 800
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1550199966
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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