Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_E07
         (734 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical pr...   204   7e-53
Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical pr...    29   2.6  
Z66499-5|CAE17941.1|  143|Caenorhabditis elegans Hypothetical pr...    28   6.0  
AF098985-2|AAC67420.3|  166|Caenorhabditis elegans Hypothetical ...    28   6.0  

>Z81516-3|CAB04204.1|  370|Caenorhabditis elegans Hypothetical
           protein F26H9.5 protein.
          Length = 370

 Score =  204 bits (497), Expect = 7e-53
 Identities = 97/201 (48%), Positives = 137/201 (68%), Gaps = 2/201 (0%)
 Frame = -1

Query: 734 TIHGVEFD-FIPDTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNIGTSGVALVIVRE 558
           T+HG+EF    P++  VPL+AD+SSN M++  D    GV++ GAQKN+G +G+ +VIVR+
Sbjct: 154 TVHGIEFTPTAPESHNVPLVADVSSNFMARPFDFKDHGVVFGGAQKNLGAAGLTIVIVRK 213

Query: 557 DLLNQALPTCPSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKK 378
           DL+ +     PS+  +      NS+ NTPP   IY    VL+WI+  GGL+ + +L  +K
Sbjct: 214 DLIGKQQAITPSVFSYKEMIANNSLYNTPPTGGIYTTNLVLKWIKSKGGLQAIYELNLQK 273

Query: 377 ASLIYNTIEQSNGFYYAPVAKNVRSKMNVPFRIGCP-GDDALEKEFLKGAETLGLIQLKG 201
           + +IY+ I+ SNGFY+  V K  RS MNV FRIG P G+D LE++FLKG+    +I LKG
Sbjct: 274 SGMIYDIIDNSNGFYHCAVDKRYRSIMNVCFRIGGPSGNDELEEKFLKGSIERNMISLKG 333

Query: 200 HRDVGGIRASIYNAVTLEEVQ 138
           HR VGGIRAS+YNA+++EE Q
Sbjct: 334 HRSVGGIRASLYNAISVEETQ 354


>Z48544-2|CAA88437.1|  766|Caenorhabditis elegans Hypothetical
           protein ZK945.3 protein.
          Length = 766

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 12/36 (33%), Positives = 21/36 (58%)
 Frame = -1

Query: 701 DTKGVPLIADMSSNIMSKKVDVSKFGVIYAGAQKNI 594
           D + +  +A+  SN  SKK    ++G +YAG  +N+
Sbjct: 566 DKREITFLAEGDSNPHSKKTQKDRYGQLYAGITENL 601


>Z81078-5|CAB03078.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -1

Query: 533 TC-PSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNT 357
           TC P       + K    ++  PM+  +  G+ +  I  +G    + +   +K ++I   
Sbjct: 299 TCDPRTYKLATDNKTCERIDQSPMWLFFAHGQSVWNISTDGKSFQLQRAGLQKTAMIDID 358

Query: 356 IEQSNGFYYAPVAKNVRSKMNV 291
           +++ N  YYA +  NV  +MN+
Sbjct: 359 VKE-NRLYYADIGANVIERMNI 379


>Z75535-4|CAA99828.2|  722|Caenorhabditis elegans Hypothetical
           protein F14B4.1 protein.
          Length = 722

 Score = 29.5 bits (63), Expect = 2.6
 Identities = 19/82 (23%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
 Frame = -1

Query: 533 TC-PSLLDWTANYKQNSILNTPPMFAIYIMGRVLQWIQRNGGLEGMSQLATKKASLIYNT 357
           TC P       + K    ++  PM+  +  G+ +  I  +G    + +   +K ++I   
Sbjct: 299 TCDPRTYKLATDNKTCERIDQSPMWLFFAHGQSVWNISTDGKSFQLQRAGLQKTAMIDID 358

Query: 356 IEQSNGFYYAPVAKNVRSKMNV 291
           +++ N  YYA +  NV  +MN+
Sbjct: 359 VKE-NRLYYADIGANVIERMNI 379


>Z66499-5|CAE17941.1|  143|Caenorhabditis elegans Hypothetical
           protein T01B7.9 protein.
          Length = 143

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 13/36 (36%), Positives = 18/36 (50%)
 Frame = +3

Query: 525 GTCR*SLIQKILSNNDKRYPRCTNILLSTSIYHPKL 632
           G C   +  K L NN      C N+ +S+S+Y P L
Sbjct: 59  GVCYGDICVKSLVNNHYVSKGCENLTISSSVYEPHL 94


>AF098985-2|AAC67420.3|  166|Caenorhabditis elegans Hypothetical
           protein C08G5.2 protein.
          Length = 166

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 25/90 (27%), Positives = 40/90 (44%), Gaps = 1/90 (1%)
 Frame = -1

Query: 683 LIADMSSNIMSKKVDVSKFGVIYA-GAQKNIGTSGVALVIVREDLLNQALPTCPSLLDWT 507
           +I D+  N+ +  VD    GV Y  GA+ N+  +G   V+    L  +  P  P  +DW 
Sbjct: 43  IIKDLDLNLNTITVD----GVEYQLGAENNL--NGTPKVLATRQLEGRR-P--PMNVDWL 93

Query: 506 ANYKQNSILNTPPMFAIYIMGRVLQWIQRN 417
                N I++ PP F  + +  +  W   N
Sbjct: 94  TIPNDNRIIDLPPSFEQFKIRMLSDWSPNN 123


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,231,957
Number of Sequences: 27780
Number of extensions: 369607
Number of successful extensions: 968
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 939
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 967
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1724918872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)