Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_E02
         (741 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical pr...    33   0.21 
Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical pr...    30   2.0  
Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical pr...    28   6.0  
Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical pr...    28   8.0  
U80452-14|AAB37849.1|  157|Caenorhabditis elegans Hypothetical p...    28   8.0  
U23514-3|AAC46542.2|  421|Caenorhabditis elegans Hypothetical pr...    28   8.0  

>Z72514-9|CAA96680.3|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 19/84 (22%), Positives = 37/84 (44%)
 Frame = +2

Query: 449 NISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRH 628
           +  +C ++ T++  + + L VI  VI R +  VI    ++ +  H  S SI L  +W+  
Sbjct: 273 DFDTCVSLATTNCLLIVSLLVIKLVIERFVVNVISTRSVSSIETHLVSQSIYLFSMWFAL 332

Query: 629 KFVFCRTRGTCFQWIYAFSFRWST 700
           K      +       +  +  W+T
Sbjct: 333 KLAHPSAQPVAAWVFFTSNLAWTT 356


>Z68001-3|CAO78709.1|  449|Caenorhabditis elegans Hypothetical
           protein T10B10.8 protein.
          Length = 449

 Score = 33.1 bits (72), Expect = 0.21
 Identities = 19/84 (22%), Positives = 37/84 (44%)
 Frame = +2

Query: 449 NISSCRAIKTSHFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRH 628
           +  +C ++ T++  + + L VI  VI R +  VI    ++ +  H  S SI L  +W+  
Sbjct: 273 DFDTCVSLATTNCLLIVSLLVIKLVIERFVVNVISTRSVSSIETHLVSQSIYLFSMWFAL 332

Query: 629 KFVFCRTRGTCFQWIYAFSFRWST 700
           K      +       +  +  W+T
Sbjct: 333 KLAHPSAQPVAAWVFFTSNLAWTT 356


>Z77656-2|CAE17769.1|  724|Caenorhabditis elegans Hypothetical
           protein F07B10.4 protein.
          Length = 724

 Score = 30.7 bits (66), Expect = 1.1
 Identities = 33/128 (25%), Positives = 57/128 (44%), Gaps = 5/128 (3%)
 Frame = +2

Query: 317 FITIPRYHQHRITS--FAL*KIIFNRSI*F*TLCIADCSTFTSRNINISSCR---AIKTS 481
           F+  P+++  + TS  F +  I    +  F       CS  T   I + S R   + KT 
Sbjct: 572 FVWCPKWYALKSTSWEFIVMMIASMTATVFFACIFVVCSLATI--IVVQSARDTMSYKTV 629

Query: 482 HFHIRIVLSVISFVIVRAIFIVIPHTLINKLWFHFGSDSIVLIFVWYRHKFVFCRTRGTC 661
            +HI++ +  +   +++A+F+V+P T I  L  +F S  I      Y +  +    +GT 
Sbjct: 630 KYHIQVTVLFLCSCVIQALFVVLPVTHI-VLCVYFDSFKIYTKDYIY-YSLLTQAHQGTA 687

Query: 662 FQWIYAFS 685
           F   Y  S
Sbjct: 688 FTLFYVLS 695


>U53342-5|AAA96217.1|  178|Caenorhabditis elegans Hypothetical
           protein F01G12.1 protein.
          Length = 178

 Score = 29.9 bits (64), Expect = 2.0
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 2/44 (4%)
 Frame = +2

Query: 554 HTLINKLWFHFGSDSIVLIFVW-YRHKFVFCRTRGTCF-QWIYA 679
           HT+  K+WFH+G D +VL   W    K       G  F  WI+A
Sbjct: 116 HTM--KMWFHWGFDEVVLFDFWRIDDKNALAVILGAGFGHWIFA 157


>Z81098-2|CAB03182.1|  961|Caenorhabditis elegans Hypothetical
           protein K07A12.2 protein.
          Length = 961

 Score = 28.3 bits (60), Expect = 6.0
 Identities = 14/33 (42%), Positives = 19/33 (57%)
 Frame = +1

Query: 37  HKLLSXCQSFLGVPDGEFRSTSSSSFLPCIGSL 135
           ++ LS     LGVP G  + +  SSFLP +G L
Sbjct: 497 NETLSEGSRLLGVPQGSNQHSLLSSFLPSLGPL 529


>Z79603-2|CAB01893.4|  500|Caenorhabditis elegans Hypothetical
           protein M163.2 protein.
          Length = 500

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 10/22 (45%), Positives = 16/22 (72%)
 Frame = +1

Query: 277 YISTSPSCRLSSLIYNDSQISP 342
           Y S SP+  +S+ +YN S++SP
Sbjct: 38  YSSMSPASSVSNTVYNSSEVSP 59


>U80452-14|AAB37849.1|  157|Caenorhabditis elegans Hypothetical
           protein C16C8.9 protein.
          Length = 157

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 11/27 (40%), Positives = 17/27 (62%)
 Frame = +2

Query: 29  HSVTSFSLSVKVSWAYLMASSDRLLHH 109
           + +T F LS  ++  YLM S D+ +HH
Sbjct: 127 YKLTGFILSKNLAGHYLMTSIDKTIHH 153


>U23514-3|AAC46542.2|  421|Caenorhabditis elegans Hypothetical
           protein F48E8.7a protein.
          Length = 421

 Score = 27.9 bits (59), Expect = 8.0
 Identities = 13/26 (50%), Positives = 18/26 (69%)
 Frame = +2

Query: 233 VFSDYKRIAPFPCFNTYPPLLLAVSL 310
           VFSD + I+ FPC+N YP   L +S+
Sbjct: 27  VFSD-ETISIFPCYNLYPKKSLRLSV 51


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,011,015
Number of Sequences: 27780
Number of extensions: 280606
Number of successful extensions: 761
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 761
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1745954468
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)