Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D22
         (710 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0102 + 14810293-14811345,14811989-14812108,14812745-148127...    30   2.1  
11_06_0032 + 19432305-19432510,19433390-19434326,19434880-194349...    28   6.4  
02_05_1320 - 35693575-35694846                                         28   8.4  

>10_08_0102 +
           14810293-14811345,14811989-14812108,14812745-14812792,
           14812886-14813006,14814073-14814129,14815109-14815217,
           14815298-14815523,14815608-14815724,14816041-14816119,
           14816303-14816325,14816698-14816742,14816872-14817030
          Length = 718

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/49 (26%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
 Frame = -3

Query: 324 HPRYADPDDCQFF--YVCINGNTPRRSGCKLGQAFDDVSKKCEWARKVP 184
           +P    P++ +F   ++C++ ++P+ +  ++   FDD +KK    RK P
Sbjct: 57  YPNGNRPENAEFISVFLCLDSSSPKPAMLQVTITFDDEAKKQSQLRKAP 105


>11_06_0032 +
           19432305-19432510,19433390-19434326,19434880-19434975,
           19435518-19435654,19435888-19436056
          Length = 514

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 12/29 (41%), Positives = 15/29 (51%)
 Frame = -3

Query: 450 GLVYNDKTGICTWPDEAKKKGCVAAEVFQ 364
           G  Y  +  IC  PD AK +GC   EV +
Sbjct: 110 GSAYGGQRSICCTPDLAKLEGCKQGEVIR 138


>02_05_1320 - 35693575-35694846
          Length = 423

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/52 (28%), Positives = 21/52 (40%)
 Frame = -3

Query: 228 FDDVSKKCEWARKVPECAEWYKGQLTDAELDALENXXXXXXXPAGSPSRRKP 73
           FD++  K +    +  C E  KG L  A+  A +         AG   R KP
Sbjct: 205 FDEMPSKADVEPDIVSCNEILKGYLNAADYAAFDQFLKDNTTAAGGKRRLKP 256


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,254,530
Number of Sequences: 37544
Number of extensions: 438735
Number of successful extensions: 1092
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1067
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1092
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)