Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D20
         (485 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U54999-1|AAB40385.1|  677|Homo sapiens LGN protein protein.            29   8.7  
CR456786-1|CAG33067.1|  677|Homo sapiens GPSM2 protein.                29   8.7  
BC027732-1|AAH27732.1|  677|Homo sapiens G-protein signaling mod...    29   8.7  
AY136740-1|AAN01266.1|  677|Homo sapiens LGN protein protein.          29   8.7  
AL449266-9|CAI14361.1|  684|Homo sapiens G-protein signalling mo...    29   8.7  

>U54999-1|AAB40385.1|  677|Homo sapiens LGN protein protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 213 RHPARAVGVDNRAGEGIPCLLYGLAATQLIRHEELVHTSKGPVPIYFLLPEDKGAL 46
           +H A A  +++R GEG  C   G A T L  H++ +H ++  + I   + +  G L
Sbjct: 300 KHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGEL 355


>CR456786-1|CAG33067.1|  677|Homo sapiens GPSM2 protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 213 RHPARAVGVDNRAGEGIPCLLYGLAATQLIRHEELVHTSKGPVPIYFLLPEDKGAL 46
           +H A A  +++R GEG  C   G A T L  H++ +H ++  + I   + +  G L
Sbjct: 300 KHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGEL 355


>BC027732-1|AAH27732.1|  677|Homo sapiens G-protein signaling
           modulator 2 (AGS3-like, C. elegans) protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 213 RHPARAVGVDNRAGEGIPCLLYGLAATQLIRHEELVHTSKGPVPIYFLLPEDKGAL 46
           +H A A  +++R GEG  C   G A T L  H++ +H ++  + I   + +  G L
Sbjct: 300 KHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGEL 355


>AY136740-1|AAN01266.1|  677|Homo sapiens LGN protein protein.
          Length = 677

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 213 RHPARAVGVDNRAGEGIPCLLYGLAATQLIRHEELVHTSKGPVPIYFLLPEDKGAL 46
           +H A A  +++R GEG  C   G A T L  H++ +H ++  + I   + +  G L
Sbjct: 300 KHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGEL 355


>AL449266-9|CAI14361.1|  684|Homo sapiens G-protein signalling
           modulator 2 (AGS3-like, C. elegans) protein.
          Length = 684

 Score = 29.1 bits (62), Expect = 8.7
 Identities = 17/56 (30%), Positives = 29/56 (51%)
 Frame = -3

Query: 213 RHPARAVGVDNRAGEGIPCLLYGLAATQLIRHEELVHTSKGPVPIYFLLPEDKGAL 46
           +H A A  +++R GEG  C   G A T L  H++ +H ++  + I   + +  G L
Sbjct: 307 KHLAIAQELNDRIGEGRACWSLGNAYTALGNHDQAMHFAEKHLEISREVGDKSGEL 362


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 83,119,890
Number of Sequences: 237096
Number of extensions: 1901651
Number of successful extensions: 3778
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 3646
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3777
length of database: 76,859,062
effective HSP length: 84
effective length of database: 56,942,998
effective search space used: 4384610846
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)