Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D20
         (485 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF016445-3|AAC69063.2|  372|Caenorhabditis elegans Serpentine re...    32   0.19 
Z81088-7|CAB03129.2|  337|Caenorhabditis elegans Hypothetical pr...    30   1.0  
Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical pr...    27   5.5  
Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical pr...    27   5.5  
AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPas...    27   5.5  
U23449-5|AAC24296.2|  365|Caenorhabditis elegans Hypothetical pr...    27   9.5  

>AF016445-3|AAC69063.2|  372|Caenorhabditis elegans Serpentine
           receptor, class w protein133 protein.
          Length = 372

 Score = 32.3 bits (70), Expect = 0.19
 Identities = 13/32 (40%), Positives = 20/32 (62%)
 Frame = -1

Query: 437 KCIIYGTYQIISSKSCLWYLLIYARNGNVWLL 342
           KC    +YQ+I   +CL+++  YAR  + WLL
Sbjct: 101 KCFNESSYQMIFLNNCLFFINEYARRCSTWLL 132


>Z81088-7|CAB03129.2|  337|Caenorhabditis elegans Hypothetical
           protein F53F1.7 protein.
          Length = 337

 Score = 29.9 bits (64), Expect = 1.0
 Identities = 14/32 (43%), Positives = 18/32 (56%)
 Frame = -1

Query: 458 FYGTYNIKCIIYGTYQIISSKSCLWYLLIYAR 363
           FY  YNI C+IY TY         W LL+++R
Sbjct: 277 FYFLYNILCVIYSTYS-------AWMLLLFSR 301


>Z92807-4|CAB07263.1| 1004|Caenorhabditis elegans Hypothetical
           protein K11D9.2b protein.
          Length = 1004

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -3

Query: 372 IRQEWKCMATLIARFSNKPTSSEVLTAYLTQCNEPPWTSYFVKGAPRQPVGRRRH 208
           I+Q+WK   TL   FS    S   ++AY    +       FVKGAP   +GR  H
Sbjct: 479 IQQKWKKEFTL--EFSRDRKS---MSAYCFPASGGSGAKMFVKGAPEGVLGRCTH 528


>Z92807-3|CAB07262.1| 1059|Caenorhabditis elegans Hypothetical
           protein K11D9.2a protein.
          Length = 1059

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -3

Query: 372 IRQEWKCMATLIARFSNKPTSSEVLTAYLTQCNEPPWTSYFVKGAPRQPVGRRRH 208
           I+Q+WK   TL   FS    S   ++AY    +       FVKGAP   +GR  H
Sbjct: 479 IQQKWKKEFTL--EFSRDRKS---MSAYCFPASGGSGAKMFVKGAPEGVLGRCTH 528


>AJ012296-1|CAA09985.1| 1059|Caenorhabditis elegans calcium ATPase
           protein.
          Length = 1059

 Score = 27.5 bits (58), Expect = 5.5
 Identities = 20/55 (36%), Positives = 26/55 (47%)
 Frame = -3

Query: 372 IRQEWKCMATLIARFSNKPTSSEVLTAYLTQCNEPPWTSYFVKGAPRQPVGRRRH 208
           I+Q+WK   TL   FS    S   ++AY    +       FVKGAP   +GR  H
Sbjct: 479 IQQKWKKEFTL--EFSRDRKS---MSAYCFPASGGSGAKMFVKGAPEGVLGRCTH 528


>U23449-5|AAC24296.2|  365|Caenorhabditis elegans Hypothetical
           protein K06A1.1 protein.
          Length = 365

 Score = 26.6 bits (56), Expect = 9.5
 Identities = 15/44 (34%), Positives = 22/44 (50%)
 Frame = -1

Query: 323 INPHHPRF*QPI*LSVTNHLGLLIL*REHHGNLLVAAAIRRVQL 192
           + P+ PR   PI  SV  HL    L     GN+ ++A +  V+L
Sbjct: 303 LTPYFPRNMLPIDPSVQQHLSHFTLMTHGFGNVAMSAVLESVKL 346


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,644,765
Number of Sequences: 27780
Number of extensions: 283708
Number of successful extensions: 617
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 604
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 617
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 903458030
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)