Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D20
         (485 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   4.0  
AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc fi...    22   4.0  
DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein ...    21   5.3  
S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor prot...    21   9.2  
S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor prot...    21   9.2  

>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 9/23 (39%), Positives = 13/23 (56%)
 Frame = -3

Query: 150 YGLAATQLIRHEELVHTSKGPVP 82
           Y  AA+  + HE +V T+  P P
Sbjct: 491 YDGAASTAVIHEPVVETNSSPSP 513


>AB208106-1|BAE72138.1|  111|Apis mellifera Broad complex zinc
           finger domain-Z1 isoform protein.
          Length = 111

 Score = 21.8 bits (44), Expect = 4.0
 Identities = 11/28 (39%), Positives = 14/28 (50%)
 Frame = -3

Query: 162 PCLLYGLAATQLIRHEELVHTSKGPVPI 79
           PC     + T+L RH + VHT     PI
Sbjct: 7   PCNKILTSLTRLRRHIQNVHTRPSKEPI 34


>DQ855486-1|ABH88173.1|  104|Apis mellifera chemosensory protein 5
           protein.
          Length = 104

 Score = 21.4 bits (43), Expect = 5.3
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = +3

Query: 153 VNKVYLHRPYCQPQLH 200
           ++K    RPY Q QLH
Sbjct: 23  ISKFLKDRPYVQKQLH 38


>S76957-1|AAB33932.1|  169|Apis mellifera olfactory receptor
           protein.
          Length = 169

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/32 (28%), Positives = 12/32 (37%)
 Frame = +1

Query: 100 CVNKFFMPYKLGCCKAIQ*TRYTFTGPIVNPN 195
           C+     PY +G    +  T   F  P   PN
Sbjct: 21  CIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPN 52


>S76956-1|AAB33931.1|  168|Apis mellifera olfactory receptor
           protein.
          Length = 168

 Score = 20.6 bits (41), Expect = 9.2
 Identities = 9/32 (28%), Positives = 12/32 (37%)
 Frame = +1

Query: 100 CVNKFFMPYKLGCCKAIQ*TRYTFTGPIVNPN 195
           C+     PY +G    +  T   F  P   PN
Sbjct: 20  CIQLVVGPYVIGLMNTMTHTTNAFCLPFCGPN 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 156,500
Number of Sequences: 438
Number of extensions: 3401
Number of successful extensions: 5
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 146,343
effective HSP length: 53
effective length of database: 123,129
effective search space used: 13297932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)