Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D17
(518 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical pr... 144 4e-35
Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical p... 131 3e-31
Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical pr... 131 3e-31
AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical ... 28 3.5
Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical pr... 28 4.6
Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical pr... 28 4.6
AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical ... 28 4.6
Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical pr... 27 8.0
>Z68315-8|CAA92674.1| 142|Caenorhabditis elegans Hypothetical
protein F28C6.7a protein.
Length = 142
Score = 144 bits (348), Expect = 4e-35
Identities = 66/114 (57%), Positives = 90/114 (78%)
Frame = -2
Query: 457 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 278
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSKCVIVKLKMNKD 116
+KG G+V++ YRKKFV++I++I REKANG+T ++GIHPSK I KLK++KD
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSKVAITKLKLDKD 113
>Z68315-10|CAD59149.1| 109|Caenorhabditis elegans Hypothetical
protein F28C6.7c protein.
Length = 109
Score = 131 bits (317), Expect = 3e-31
Identities = 60/103 (58%), Positives = 82/103 (79%)
Frame = -2
Query: 457 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 278
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSK 149
+KG G+V++ YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>Z68315-9|CAA92678.1| 106|Caenorhabditis elegans Hypothetical
protein F28C6.7b protein.
Length = 106
Score = 131 bits (317), Expect = 3e-31
Identities = 60/103 (58%), Positives = 82/103 (79%)
Frame = -2
Query: 457 MKFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRG 278
MK N V+S K+RK HF+APSH RR +MS+PL+KELR K ++++PIR DDEV V+RG
Sbjct: 1 MKVNPFVSSDSGKSRKAHFNAPSHERRRIMSAPLTKELRTKHGIRAIPIRTDDEVVVMRG 60
Query: 277 HYKGQQVGKVMQVYRKKFVVYIERIQREKANGATAYVGIHPSK 149
+KG G+V++ YRKKFV++I++I REKANG+T ++GIHPSK
Sbjct: 61 RHKG-NTGRVLRCYRKKFVIHIDKITREKANGSTVHIGIHPSK 102
>AL031637-1|CAA21047.2| 317|Caenorhabditis elegans Hypothetical
protein Y47H9B.2 protein.
Length = 317
Score = 28.3 bits (60), Expect = 3.5
Identities = 7/24 (29%), Positives = 15/24 (62%)
Frame = +1
Query: 13 KRPPWLWQFPRCLYPCLCQVQPVC 84
++ PW ++ +YP LC++ +C
Sbjct: 249 RKYPWYYKMSSAMYPALCELAGIC 272
>Z81075-7|CAI79229.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 187 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>Z81075-3|CAI79228.1| 192|Caenorhabditis elegans Hypothetical
protein F35C12.3b protein.
Length = 192
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 187 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 67 WRCMFAQNKCIGTTFQNIPISLC 89
>Z81075-2|CAB03048.1| 368|Caenorhabditis elegans Hypothetical
protein F35C12.3a protein.
Length = 368
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 187 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 243 WRCMFAQNKCIGTTFQNIPISLC 265
>AL032645-3|CAI79264.1| 342|Caenorhabditis elegans Hypothetical
protein F35C12.3c protein.
Length = 342
Score = 27.9 bits (59), Expect = 4.6
Identities = 10/23 (43%), Positives = 14/23 (60%)
Frame = +1
Query: 187 WPFLFESSQCIQQTFYDTPASLC 255
W +F ++CI TF + P SLC
Sbjct: 217 WRCMFAQNKCIGTTFQNIPISLC 239
>Z50741-2|CAA90610.1| 383|Caenorhabditis elegans Hypothetical
protein F55G7.2 protein.
Length = 383
Score = 27.1 bits (57), Expect = 8.0
Identities = 17/63 (26%), Positives = 29/63 (46%)
Frame = -2
Query: 454 KFNKQVTSSRRKNRKRHFSAPSHIRRVLMSSPLSKELRQKFNVKSMPIRKDDEVQVVRGH 275
KFN+ V RR N K+ P H + + +++++ + S+P K + H
Sbjct: 94 KFNEAVALFRRDNPKKQLLLPKHWDQSTCTQQVAQKITEIAKDLSVPYPKK-----LNQH 148
Query: 274 YKG 266
YKG
Sbjct: 149 YKG 151
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,162,153
Number of Sequences: 27780
Number of extensions: 229413
Number of successful extensions: 697
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 664
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 694
length of database: 12,740,198
effective HSP length: 77
effective length of database: 10,601,138
effective search space used: 1007108110
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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