Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D13
         (577 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transpos...    25   1.3  
AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase pr...    23   7.1  
AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.       23   9.4  

>CR954257-14|CAJ14165.1| 1726|Anopheles gambiae BEL12_AG transposon
            polyprotein protein.
          Length = 1726

 Score = 25.4 bits (53), Expect = 1.3
 Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 2/64 (3%)
 Frame = -3

Query: 365  NNSGTNTTTARTDLRDLYLGLLFSTDTH--KIYGYVTNTRIKLVLVTSSTSPSGSNIRDA 192
            +++GTN   A   LR+LY   L ++DTH  ++ G+     +K    T   +P    + +A
Sbjct: 1492 SDNGTNFRGANNKLRELY--KLLNSDTHQDEVVGWCAERDMKWKF-TPPAAPHFGGLWEA 1548

Query: 191  EVRT 180
             V++
Sbjct: 1549 AVKS 1552


>AY056833-1|AAL23627.1| 1253|Anopheles gambiae chitin synthase
           protein.
          Length = 1253

 Score = 23.0 bits (47), Expect = 7.1
 Identities = 14/43 (32%), Positives = 19/43 (44%)
 Frame = -1

Query: 523 QWLCVLLLSEKIIRRCTLVASATTPAATMSCPGSGSCTRRWTP 395
           +WLC LLL +K     +  + A T A         +  RRW P
Sbjct: 500 RWLCTLLLKQKFRVEYSAASDAYTHAPE-GFNEFYNQRRRWVP 541


>AY578808-1|AAT07313.1|  458|Anopheles gambiae saxophone protein.
          Length = 458

 Score = 22.6 bits (46), Expect = 9.4
 Identities = 7/20 (35%), Positives = 14/20 (70%)
 Frame = -3

Query: 473 IGGIGNDTSSDNELSRQWLV 414
           +G +G+D +S N  ++ WL+
Sbjct: 206 LGYVGSDMTSRNSCTQLWLI 225


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 609,399
Number of Sequences: 2352
Number of extensions: 12296
Number of successful extensions: 61
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 61
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 54665910
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)