Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D13
         (577 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BC018024-1|AAH18024.1|  139|Homo sapiens trafficking protein par...   128   2e-29
BC011369-1|AAH11369.1|  139|Homo sapiens trafficking protein par...   128   2e-29
BC105809-1|AAI05810.1|  140|Homo sapiens trafficking protein par...   125   1e-28
AF089106-1|AAF00568.1|  140|Homo sapiens unknown protein.             125   1e-28
AK126779-1|BAC86686.1|  177|Homo sapiens protein ( Homo sapiens ...   124   2e-28

>BC018024-1|AAH18024.1|  139|Homo sapiens trafficking protein
           particle complex 2-like protein.
          Length = 139

 Score =  128 bits (308), Expect = 2e-29
 Identities = 64/144 (44%), Positives = 93/144 (64%)
 Frame = -3

Query: 521 MAVCVAVIGKDNSPLYIGGIGNDTSSDNELSRQWLVHTALDALEERLTTANPNNSGTNTT 342
           MAVC+AVI K+N PLYI      T ++NEL   ++VHT+LD ++E+++            
Sbjct: 1   MAVCIAVIAKENYPLYI----RSTPTENELKFHYMVHTSLDVVDEKISAMGK-------- 48

Query: 341 TARTDLRDLYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLH 162
            A  D R+LYLGLL+ T+ +K+YGYVTN+++K V+V  S   S + +RD E+R+  R+LH
Sbjct: 49  -ALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDS---SNTALRDNEIRSMFRKLH 104

Query: 161 ALYADAICNPFHLPGDQITXPKFD 90
             Y D +CNPF+ PGD+I    FD
Sbjct: 105 NSYTDVMCNPFYNPGDRIQSRAFD 128


>BC011369-1|AAH11369.1|  139|Homo sapiens trafficking protein
           particle complex 2-like protein.
          Length = 139

 Score =  128 bits (308), Expect = 2e-29
 Identities = 64/144 (44%), Positives = 93/144 (64%)
 Frame = -3

Query: 521 MAVCVAVIGKDNSPLYIGGIGNDTSSDNELSRQWLVHTALDALEERLTTANPNNSGTNTT 342
           MAVC+AVI K+N PLYI      T ++NEL   ++VHT+LD ++E+++            
Sbjct: 1   MAVCIAVIAKENYPLYI----RSTPTENELKFHYMVHTSLDVVDEKISAMGK-------- 48

Query: 341 TARTDLRDLYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLH 162
            A  D R+LYLGLL+ T+ +K+YGYVTN+++K V+V  S   S + +RD E+R+  R+LH
Sbjct: 49  -ALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDS---SNTALRDNEIRSMFRKLH 104

Query: 161 ALYADAICNPFHLPGDQITXPKFD 90
             Y D +CNPF+ PGD+I    FD
Sbjct: 105 NSYTDVMCNPFYNPGDRIQSRAFD 128


>BC105809-1|AAI05810.1|  140|Homo sapiens trafficking protein
           particle complex 2-like protein.
          Length = 140

 Score =  125 bits (301), Expect = 1e-28
 Identities = 64/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
 Frame = -3

Query: 521 MAVCVAVIGKDNSPLYIGGIGNDTSSDNELSRQWLVHTALDALEERLTTANPNNSGTNTT 342
           MAVC+AVI K+N PLYI      T ++NEL   ++VHT+LD ++E+++            
Sbjct: 1   MAVCIAVIAKENYPLYI----RSTPTENELKFHYMVHTSLDVVDEKISAMGK-------- 48

Query: 341 TARTDLRDLYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLH 162
            A  D R+LYLGLL+ T+ +K+YGYVTN+++K V+V  S   S + +RD E+R+  R+LH
Sbjct: 49  -ALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDS---SNTALRDNEIRSMFRKLH 104

Query: 161 ALYADAICNPFHLPGDQITXPK-FD 90
             Y D +CNPF+ PGD+I   + FD
Sbjct: 105 NSYTDVMCNPFYNPGDRIQSSRAFD 129


>AF089106-1|AAF00568.1|  140|Homo sapiens unknown protein.
          Length = 140

 Score =  125 bits (301), Expect = 1e-28
 Identities = 64/145 (44%), Positives = 94/145 (64%), Gaps = 1/145 (0%)
 Frame = -3

Query: 521 MAVCVAVIGKDNSPLYIGGIGNDTSSDNELSRQWLVHTALDALEERLTTANPNNSGTNTT 342
           MAVC+AVI K+N PLYI      T ++NEL   ++VHT+LD ++E+++            
Sbjct: 1   MAVCIAVIAKENYPLYI----RSTPTENELKFHYMVHTSLDVVDEKISAMGK-------- 48

Query: 341 TARTDLRDLYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLH 162
            A  D R+LYLGLL+ T+ +K+YGYVTN+++K V+V  S   S + +RD E+R+  R+LH
Sbjct: 49  -ALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDS---SNTALRDNEIRSMFRKLH 104

Query: 161 ALYADAICNPFHLPGDQITXPK-FD 90
             Y D +CNPF+ PGD+I   + FD
Sbjct: 105 NSYTDVMCNPFYNPGDRIQSSRAFD 129


>AK126779-1|BAC86686.1|  177|Homo sapiens protein ( Homo sapiens
           cDNA FLJ44827 fis, clone BRACE3046837. ).
          Length = 177

 Score =  124 bits (300), Expect = 2e-28
 Identities = 62/138 (44%), Positives = 91/138 (65%)
 Frame = -3

Query: 521 MAVCVAVIGKDNSPLYIGGIGNDTSSDNELSRQWLVHTALDALEERLTTANPNNSGTNTT 342
           MAVC+AVI K+N PLYI      T ++NEL   ++VHT+LD ++E+++            
Sbjct: 1   MAVCIAVIAKENYPLYI----RSTPTENELKFHYMVHTSLDVVDEKISAMGK-------- 48

Query: 341 TARTDLRDLYLGLLFSTDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLH 162
            A  D R+LYLGLL+ T+ +K+YGYVTN+++K V+V  S   S + +RD E+R+  R+LH
Sbjct: 49  -ALVDQRELYLGLLYPTEDYKVYGYVTNSKVKFVMVVDS---SNTALRDNEIRSMFRKLH 104

Query: 161 ALYADAICNPFHLPGDQI 108
             Y D +CNPF+ PGD+I
Sbjct: 105 NSYTDVMCNPFYNPGDRI 122


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 84,754,018
Number of Sequences: 237096
Number of extensions: 1836222
Number of successful extensions: 8104
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 7783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8089
length of database: 76,859,062
effective HSP length: 86
effective length of database: 56,468,806
effective search space used: 5929224630
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)