Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D13
         (577 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate c...    24   0.94 
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    22   3.8  
AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precurso...    22   3.8  
EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase p...    22   5.0  
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ...    22   5.0  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    21   8.7  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    21   8.7  
AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamat...    21   8.7  

>EF051030-1|ABN05618.1|  118|Apis mellifera phosphoenolpyruvate
           carboxykinase protein.
          Length = 118

 Score = 24.2 bits (50), Expect = 0.94
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 119 GDQITXPKFDKQGKKRMRN 63
           GD I   KFDK+G+ R  N
Sbjct: 43  GDDIAWMKFDKEGRLRAIN 61


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
           protein.
          Length = 1370

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
 Frame = +2

Query: 47  FGFKHCCAFSSC---LACRISVX*FDHR---VNGMDC 139
           F   HCC F +C   + C      ++ R    N +DC
Sbjct: 744 FALCHCCDFDACDCEMTCPAGCKCYNDRTWNTNAVDC 780


>AJ517411-1|CAD56944.1| 1770|Apis mellifera vitellogenin precursor
            protein.
          Length = 1770

 Score = 22.2 bits (45), Expect = 3.8
 Identities = 9/29 (31%), Positives = 14/29 (48%)
 Frame = -3

Query: 404  LDALEERLTTANPNNSGTNTTTARTDLRD 318
            +D L+  L  +NP N+G      R  L +
Sbjct: 1362 IDNLDVSLDVSNPKNAGKKKIDVRAKLNE 1390


>EF540769-1|ABQ14707.1|  620|Apis mellifera adenosine deaminase
           protein.
          Length = 620

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 15/67 (22%), Positives = 30/67 (44%), Gaps = 2/67 (2%)
 Frame = -3

Query: 326 LRDLYLGLLFS--TDTHKIYGYVTNTRIKLVLVTSSTSPSGSNIRDAEVRTALRRLHALY 153
           + +LY G+++   +D  + Y   T +          T PS    + A  + AL +L  ++
Sbjct: 160 INELYPGVVYKCVSDNGESYAKFTISVTIDGETFEGTGPSKKLAKAAASKAALAKLRNVH 219

Query: 152 ADAICNP 132
           + + C P
Sbjct: 220 SSSFCIP 226


>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
           protein.
          Length = 1124

 Score = 21.8 bits (44), Expect = 5.0
 Identities = 8/17 (47%), Positives = 11/17 (64%)
 Frame = +3

Query: 150 SVQSVQPAQRRPYFGIP 200
           S Q +QP Q+ PY  +P
Sbjct: 816 SSQPMQPPQQNPYMFLP 832


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 448  AATMSCPGSGSCTRRW 401
            +AT++C   G  TR W
Sbjct: 1330 SATLACNAVGDPTREW 1345


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 7/16 (43%), Positives = 10/16 (62%)
 Frame = -1

Query: 448  AATMSCPGSGSCTRRW 401
            +AT++C   G  TR W
Sbjct: 1326 SATLACNAVGDPTREW 1341


>AB161181-1|BAD08343.1|  933|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 933

 Score = 21.0 bits (42), Expect = 8.7
 Identities = 11/32 (34%), Positives = 16/32 (50%)
 Frame = +3

Query: 75  LLALLVEFRXSNLITG*MEWIAYGVSVQSVQP 170
           +LALLV     ++ +G  +W   G S   V P
Sbjct: 23  MLALLVSLHRLSIYSGGSDWRVAGRSESVVIP 54


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 161,790
Number of Sequences: 438
Number of extensions: 3125
Number of successful extensions: 10
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 16626408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)