Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D12
(440 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein. 25 0.90
AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein. 24 2.1
CR954257-6|CAJ14157.1| 375|Anopheles gambiae RrnaAD, ribosomal ... 23 3.6
AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein. 23 6.4
AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled ... 22 8.4
AY341231-1|AAR13795.1| 231|Anopheles gambiae vacuolar ATPase pr... 22 8.4
AY341230-1|AAR13794.1| 231|Anopheles gambiae vacuolar ATPase pr... 22 8.4
AY341229-1|AAR13793.1| 231|Anopheles gambiae vacuolar ATPase pr... 22 8.4
AY341228-1|AAR13792.1| 231|Anopheles gambiae vacuolar ATPase pr... 22 8.4
AY341227-1|AAR13791.1| 231|Anopheles gambiae vacuolar ATPase pr... 22 8.4
AY341226-1|AAR13790.1| 231|Anopheles gambiae vacuolar ATPase pr... 22 8.4
AY341225-1|AAR13789.1| 231|Anopheles gambiae vacuolar ATPase pr... 22 8.4
>AY753540-1|AAV28543.1| 3320|Anopheles gambiae SGS3 protein.
Length = 3320
Score = 25.4 bits (53), Expect = 0.90
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 242 LPFFQQEGSYLQGRHHCHY*NYR 310
L F++ EGS L RH+C YR
Sbjct: 92 LQFYRMEGSDLTLRHYCSETKYR 114
>AY753539-1|AAV28542.1| 3318|Anopheles gambiae SGS2 protein.
Length = 3318
Score = 24.2 bits (50), Expect = 2.1
Identities = 11/23 (47%), Positives = 14/23 (60%)
Frame = +2
Query: 242 LPFFQQEGSYLQGRHHCHY*NYR 310
L F++ EGS L RH+C YR
Sbjct: 92 LQFYRMEGSDLTLRHYCSEAIYR 114
>CR954257-6|CAJ14157.1| 375|Anopheles gambiae RrnaAD, ribosomal RNA
adenine dimethylaseprotein.
Length = 375
Score = 23.4 bits (48), Expect = 3.6
Identities = 13/41 (31%), Positives = 20/41 (48%)
Frame = -1
Query: 227 TNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLP 105
++ K+PT + +LLK YVD + + GEL P
Sbjct: 272 SSKKDPTSGVLPSQLLKSVPLSSNDYVDNFNIFTEFGELTP 312
>AJ535204-1|CAD59404.1| 1187|Anopheles gambiae SMC2 protein protein.
Length = 1187
Score = 22.6 bits (46), Expect = 6.4
Identities = 13/40 (32%), Positives = 21/40 (52%)
Frame = -2
Query: 178 KSENSKEKYM*T*ENFMKRMVNFYQVQKGISLTPEQWRKL 59
KSE S++ + ++F + ++QKGI EQ KL
Sbjct: 802 KSEESRKNWKKHEQDFETLKLEIEELQKGIVTAKEQAVKL 841
>AY500851-1|AAS77205.1| 605|Anopheles gambiae G-protein coupled
receptor 3 protein.
Length = 605
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = +3
Query: 15 HMELTVSLTSSPTD 56
H+E T+ LT SP D
Sbjct: 70 HLERTIELTFSPAD 83
>AY341231-1|AAR13795.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGEL 111
R F G +Y D+ YE+ G +
Sbjct: 157 RGFPGYMYTDLATIYERAGRV 177
>AY341230-1|AAR13794.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGEL 111
R F G +Y D+ YE+ G +
Sbjct: 157 RGFPGYMYTDLATIYERAGRV 177
>AY341229-1|AAR13793.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGEL 111
R F G +Y D+ YE+ G +
Sbjct: 157 RGFPGYMYTDLATIYERAGRV 177
>AY341228-1|AAR13792.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGEL 111
R F G +Y D+ YE+ G +
Sbjct: 157 RGFPGYMYTDLATIYERAGRV 177
>AY341227-1|AAR13791.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGEL 111
R F G +Y D+ YE+ G +
Sbjct: 157 RGFPGYMYTDLATIYERAGRV 177
>AY341226-1|AAR13790.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGEL 111
R F G +Y D+ YE+ G +
Sbjct: 157 RGFPGYMYTDLATIYERAGRV 177
>AY341225-1|AAR13789.1| 231|Anopheles gambiae vacuolar ATPase
protein.
Length = 231
Score = 22.2 bits (45), Expect = 8.4
Identities = 8/21 (38%), Positives = 12/21 (57%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGEL 111
R F G +Y D+ YE+ G +
Sbjct: 157 RGFPGYMYTDLATIYERAGRV 177
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 390,816
Number of Sequences: 2352
Number of extensions: 6012
Number of successful extensions: 24
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 24
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 36993357
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -