Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D12
(440 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
X79805-1|CAA56200.1| 127|Homo sapiens PC4, p15 protein. 38 0.015
U12979-1|AAA20980.1| 127|Homo sapiens PC4 protein. 38 0.015
CR456902-1|CAG33183.1| 127|Homo sapiens PC4 protein. 38 0.015
BC105972-1|AAI05973.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 38 0.015
BC022339-1|AAH22339.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 38 0.015
BC018189-1|AAH18189.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 38 0.015
BC010537-1|AAH10537.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 38 0.015
BC009610-1|AAH09610.1| 127|Homo sapiens SUB1 homolog (S. cerevi... 38 0.015
AY584192-1|AAT72821.1| 73|Homo sapiens activated RNA polymeras... 38 0.015
AB209285-1|BAD92522.1| 134|Homo sapiens activated RNA polymeras... 38 0.015
AK095939-1|BAC04654.1| 377|Homo sapiens protein ( Homo sapiens ... 30 3.1
CR457254-1|CAG33535.1| 251|Homo sapiens FLJ10350 protein. 29 5.4
BC128042-1|AAI28043.1| 164|Homo sapiens MAP7D1 protein protein. 29 5.4
BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing ... 29 5.4
BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein. 29 5.4
BC027334-1|AAH27334.1| 216|Homo sapiens MAP7D1 protein protein. 29 5.4
AK001212-1|BAA91557.1| 251|Homo sapiens protein ( Homo sapiens ... 29 5.4
AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein. 29 5.4
>X79805-1|CAA56200.1| 127|Homo sapiens PC4, p15 protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>U12979-1|AAA20980.1| 127|Homo sapiens PC4 protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>CR456902-1|CAG33183.1| 127|Homo sapiens PC4 protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC105972-1|AAI05973.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC022339-1|AAH22339.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC018189-1|AAH18189.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC010537-1|AAH10537.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>BC009610-1|AAH09610.1| 127|Homo sapiens SUB1 homolog (S.
cerevisiae) protein.
Length = 127
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 70 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 101
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 100 RKGISLNPEQWSQLKEQISDIDDAVRKL 127
>AY584192-1|AAT72821.1| 73|Homo sapiens activated RNA polymerase
II transcription cofactor 4 protein.
Length = 73
Score = 37.9 bits (84), Expect = 0.015
Identities = 15/32 (46%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGK+ +DIRE++ + GE+ PG K
Sbjct: 16 RYVSVRDFKGKILIDIREYWMDSEGEMKPGRK 47
>AB209285-1|BAD92522.1| 134|Homo sapiens activated RNA polymerase
II transcription cofactor 4 variant protein.
Length = 134
Score = 37.9 bits (84), Expect = 0.015
Identities = 16/32 (50%), Positives = 24/32 (75%), Gaps = 1/32 (3%)
Frame = -1
Query: 188 KLLKVREFKGKVYVDIREFY-EKNGELLPGTK 96
+ + VR+FKGKV +DIRE++ + GE+ PG K
Sbjct: 77 RYVSVRDFKGKVLIDIREYWMDPEGEMKPGRK 108
Score = 28.7 bits (61), Expect = 9.4
Identities = 11/28 (39%), Positives = 18/28 (64%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSSM 17
+KGISL PEQW +L ++++ V +
Sbjct: 107 RKGISLNPEQWSQLKEQISDIDDAVRKL 134
>AK095939-1|BAC04654.1| 377|Homo sapiens protein ( Homo sapiens
cDNA FLJ38620 fis, clone HEART2007767, weakly similar to
Mus musculus mRNA for E-MAP-115 protein. ).
Length = 377
Score = 30.3 bits (65), Expect = 3.1
Identities = 23/73 (31%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + R ++NG G
Sbjct: 286 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNGLQPLPAR---QENGFSTNGPS 341
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 342 GDKSLSRTPETLL 354
>CR457254-1|CAG33535.1| 251|Homo sapiens FLJ10350 protein.
Length = 251
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + +++NG G
Sbjct: 160 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNG---LQPLPAHQENGFSTNGPS 215
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 216 GDKSLSRTPETLL 228
>BC128042-1|AAI28043.1| 164|Homo sapiens MAP7D1 protein protein.
Length = 164
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + +++NG G
Sbjct: 73 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNG---LQPLPAHQENGFSTNGPS 128
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 129 GDKSLSRTPETLL 141
>BC106053-1|AAI06054.1| 841|Homo sapiens MAP7 domain containing 1
protein.
Length = 841
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + +++NG G
Sbjct: 750 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNG---LQPLPAHQENGFSTNGPS 805
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 806 GDKSLSRTPETLL 818
>BC067256-1|AAH67256.1| 678|Homo sapiens MAP7D1 protein protein.
Length = 678
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + +++NG G
Sbjct: 587 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNG---LQPLPAHQENGFSTNGPS 642
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 643 GDKSLSRTPETLL 655
>BC027334-1|AAH27334.1| 216|Homo sapiens MAP7D1 protein protein.
Length = 216
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + +++NG G
Sbjct: 125 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNG---LQPLPAHQENGFSTNGPS 180
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 181 GDKSLSRTPETLL 193
>AK001212-1|BAA91557.1| 251|Homo sapiens protein ( Homo sapiens
cDNA FLJ10350 fis, clone NT2RM2001131. ).
Length = 251
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + +++NG G
Sbjct: 160 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNG---LQPLPAHQENGFSTNGPS 215
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 216 GDKSLSRTPETLL 228
>AB033013-1|BAA86501.2| 813|Homo sapiens KIAA1187 protein protein.
Length = 813
Score = 29.5 bits (63), Expect = 5.4
Identities = 22/73 (30%), Positives = 34/73 (46%)
Frame = -1
Query: 275 EDRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVDIREFYEKNGELLPGTK 96
E R+P +K+A + +EP W L K+ L G + +++NG G
Sbjct: 722 EARSPGLQKEAVQKEEPIPQEPQWSLPSKE-LPASLVNG---LQPLPAHQENGFSTNGPS 777
Query: 95 RDKSHSRTMEKIV 57
DKS SRT E ++
Sbjct: 778 GDKSLSRTPETLL 790
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 53,216,936
Number of Sequences: 237096
Number of extensions: 920300
Number of successful extensions: 5911
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 5868
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5903
length of database: 76,859,062
effective HSP length: 83
effective length of database: 57,180,094
effective search space used: 3602345922
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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