BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D12
(440 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U18971-1|AAC46989.1| 98|Drosophila melanogaster p31A protein. 66 2e-11
BT023261-1|AAY55677.1| 110|Drosophila melanogaster IP02710p pro... 66 3e-11
AE014134-1428|AAF52619.1| 110|Drosophila melanogaster CG8396-PA... 66 3e-11
AE014134-105|AAF51496.1| 549|Drosophila melanogaster CG13691-PA... 29 3.7
AY070625-1|AAL48096.1| 376|Drosophila melanogaster RE72948p pro... 28 4.9
AE014296-1342|AAF50506.1| 376|Drosophila melanogaster CG8111-PA... 28 4.9
BT021952-1|AAX51657.1| 899|Drosophila melanogaster GH01093p pro... 28 6.5
AE014297-3189|AAF56024.1| 356|Drosophila melanogaster CG6937-PA... 28 6.5
AE014297-1303|AAF54641.1| 533|Drosophila melanogaster CG31374-P... 28 6.5
AE014297-1302|AAO41543.1| 935|Drosophila melanogaster CG31374-P... 28 6.5
AE014297-1301|AAF54642.2| 935|Drosophila melanogaster CG31374-P... 28 6.5
>U18971-1|AAC46989.1| 98|Drosophila melanogaster p31A protein.
Length = 98
Score = 66.1 bits (154), Expect = 2e-11
Identities = 33/81 (40%), Positives = 48/81 (59%), Gaps = 8/81 (9%)
Frame = -1
Query: 281 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 126
GP+DR PA KKAK +D N +W L+G + +++ EF+G+ VDIREFY+
Sbjct: 16 GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75
Query: 125 KNGELLPGTKRDKSHSRTMEK 63
K G++LPG K +ME+
Sbjct: 76 KGGQILPGKKGHLPIFNSMEE 96
>BT023261-1|AAY55677.1| 110|Drosophila melanogaster IP02710p
protein.
Length = 110
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 8/70 (11%)
Frame = -1
Query: 281 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 126
GP+DR PA KKAK +D N +W L+G + +++ EF+G+ VDIREFY+
Sbjct: 16 GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75
Query: 125 KNGELLPGTK 96
K G++LPG K
Sbjct: 76 KGGQILPGKK 85
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSS 20
+KGISL+ QW+KLL V EEV + +
Sbjct: 84 KKGISLSLIQWKKLLEVAEEVTRAIEN 110
>AE014134-1428|AAF52619.1| 110|Drosophila melanogaster CG8396-PA
protein.
Length = 110
Score = 65.7 bits (153), Expect = 3e-11
Identities = 31/70 (44%), Positives = 44/70 (62%), Gaps = 8/70 (11%)
Frame = -1
Query: 281 GPEDRNPPAEKKAKMADRTNDKEP--------TWVLQGKKLLKVREFKGKVYVDIREFYE 126
GP+DR PA KKAK +D N +W L+G + +++ EF+G+ VDIREFY+
Sbjct: 16 GPDDRIKPASKKAKESDAPNSDPKDSGENGATSWTLEGLRQVRINEFRGRKSVDIREFYD 75
Query: 125 KNGELLPGTK 96
K G++LPG K
Sbjct: 76 KGGQILPGKK 85
Score = 33.1 bits (72), Expect = 0.17
Identities = 14/27 (51%), Positives = 19/27 (70%)
Frame = -2
Query: 100 QKGISLTPEQWRKLLSVGEEVNETVSS 20
+KGISL+ QW+KLL V EEV + +
Sbjct: 84 KKGISLSLIQWKKLLEVAEEVTRAIEN 110
>AE014134-105|AAF51496.1| 549|Drosophila melanogaster CG13691-PA
protein.
Length = 549
Score = 28.7 bits (61), Expect = 3.7
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = -1
Query: 212 PTWVLQGKKLLKVREFKGKVYVD 144
PTW+++G LK+R +VYVD
Sbjct: 99 PTWLMEGVWQLKMRALTQRVYVD 121
>AY070625-1|AAL48096.1| 376|Drosophila melanogaster RE72948p
protein.
Length = 376
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGELLPGTKRDKSHSRTMEKIVISR 48
RE++ K+ VD R FY ++G P +SH + + + I R
Sbjct: 131 REWRDKI-VDSRNFYNRHGHTNPSHFPIESHVQVADAVFIGR 171
>AE014296-1342|AAF50506.1| 376|Drosophila melanogaster CG8111-PA
protein.
Length = 376
Score = 28.3 bits (60), Expect = 4.9
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = -1
Query: 173 REFKGKVYVDIREFYEKNGELLPGTKRDKSHSRTMEKIVISR 48
RE++ K+ VD R FY ++G P +SH + + + I R
Sbjct: 131 REWRDKI-VDSRNFYNRHGHTNPSHFPIESHVQVADAVFIGR 171
>BT021952-1|AAX51657.1| 899|Drosophila melanogaster GH01093p
protein.
Length = 899
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 272 DRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVD-IREFYEKNGELL-PGT 99
D + P EKK + +R + KE + LKV+E K D +++ +KN +L
Sbjct: 703 DPDEPEEKKVERRERRSGKELKILRSKLTKLKVKEEAAKKEKDALKQAMKKNQSILKEEN 762
Query: 98 KRDKSHSRTMEKIVIS 51
K+ K + ++K+ S
Sbjct: 763 KKFKKLEKEVQKMAAS 778
>AE014297-3189|AAF56024.1| 356|Drosophila melanogaster CG6937-PA
protein.
Length = 356
Score = 27.9 bits (59), Expect = 6.5
Identities = 12/27 (44%), Positives = 17/27 (62%)
Frame = -1
Query: 263 PPAEKKAKMADRTNDKEPTWVLQGKKL 183
PP +KK K+AD+ K T +Q KK+
Sbjct: 294 PPKQKKTKLADKLKRKPGTGGVQKKKI 320
>AE014297-1303|AAF54641.1| 533|Drosophila melanogaster CG31374-PA,
isoform A protein.
Length = 533
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 272 DRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVD-IREFYEKNGELL-PGT 99
D + P EKK + +R + KE + LKV+E K D +++ +KN +L
Sbjct: 337 DPDEPEEKKVERRERRSGKELKILRSKLTKLKVKEEAAKKEKDALKQAMKKNQSILKEEN 396
Query: 98 KRDKSHSRTMEKIVIS 51
K+ K + ++K+ S
Sbjct: 397 KKFKKLEKEVQKMAAS 412
>AE014297-1302|AAO41543.1| 935|Drosophila melanogaster CG31374-PC,
isoform C protein.
Length = 935
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 272 DRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVD-IREFYEKNGELL-PGT 99
D + P EKK + +R + KE + LKV+E K D +++ +KN +L
Sbjct: 739 DPDEPEEKKVERRERRSGKELKILRSKLTKLKVKEEAAKKEKDALKQAMKKNQSILKEEN 798
Query: 98 KRDKSHSRTMEKIVIS 51
K+ K + ++K+ S
Sbjct: 799 KKFKKLEKEVQKMAAS 814
>AE014297-1301|AAF54642.2| 935|Drosophila melanogaster CG31374-PB,
isoform B protein.
Length = 935
Score = 27.9 bits (59), Expect = 6.5
Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 2/76 (2%)
Frame = -1
Query: 272 DRNPPAEKKAKMADRTNDKEPTWVLQGKKLLKVREFKGKVYVD-IREFYEKNGELL-PGT 99
D + P EKK + +R + KE + LKV+E K D +++ +KN +L
Sbjct: 739 DPDEPEEKKVERRERRSGKELKILRSKLTKLKVKEEAAKKEKDALKQAMKKNQSILKEEN 798
Query: 98 KRDKSHSRTMEKIVIS 51
K+ K + ++K+ S
Sbjct: 799 KKFKKLEKEVQKMAAS 814
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,192,706
Number of Sequences: 53049
Number of extensions: 269620
Number of successful extensions: 690
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 662
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 687
length of database: 24,988,368
effective HSP length: 78
effective length of database: 20,850,546
effective search space used: 1417837128
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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