Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D09
         (677 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcript...    26   0.95 
AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical prote...    25   2.9  
AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical prote...    24   5.1  
EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger pr...    23   6.7  
AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.           23   8.9  

>AB090816-2|BAC57908.1| 1201|Anopheles gambiae reverse transcriptase
           protein.
          Length = 1201

 Score = 26.2 bits (55), Expect = 0.95
 Identities = 17/68 (25%), Positives = 30/68 (44%)
 Frame = +3

Query: 378 ESSSELSYLMTSLVANTLRISSGMEGPMLVDVWIPVFSFSEDFLLLYRSCKCGGRAGPHT 557
           +S  E   L++       R + G++G     V + +  ++E+F  LY+ C   G   P  
Sbjct: 485 DSRVEPQELLSIAAGMVTRKAPGLDGIPNAAVKVAIEEYTEEFCRLYQDCLSRGTFPPQW 544

Query: 558 SIFCVVLL 581
               +VLL
Sbjct: 545 KRQRLVLL 552


>AJ438610-7|CAD27479.1|   86|Anopheles gambiae hypothetical protein
           protein.
          Length = 86

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 11/28 (39%), Positives = 15/28 (53%)
 Frame = -2

Query: 367 PLPVGSEQKYSDAHKRLEERALDMKLKQ 284
           P    S   Y D +K  E+R L MK+K+
Sbjct: 28  PCVTHSNDDYEDGYKPQEQRKLAMKVKR 55


>AJ297931-1|CAC35451.1|  166|Anopheles gambiae hypothetical protein
           protein.
          Length = 166

 Score = 23.8 bits (49), Expect = 5.1
 Identities = 11/48 (22%), Positives = 22/48 (45%)
 Frame = -2

Query: 454 PSIPDDMRKVLATREVIKYESSDEDSCVGPLPVGSEQKYSDAHKRLEE 311
           P +P D+++ L   ++     +  D    PLP   ++   DA + + E
Sbjct: 24  PEVPSDLQQQLDELQLADKPEAPVDDAEQPLPPNGDELPEDAPEPVPE 71


>EU068741-1|ABU40241.1|  993|Anopheles gambiae anion exchanger
           protein.
          Length = 993

 Score = 23.4 bits (48), Expect = 6.7
 Identities = 10/27 (37%), Positives = 17/27 (62%)
 Frame = +3

Query: 501 DFLLLYRSCKCGGRAGPHTSIFCVVLL 581
           D LL+    + G R  P+T++FC +L+
Sbjct: 642 DHLLIPEDAR-GPRNQPNTALFCTILM 667


>AY578810-1|AAT07315.1|  897|Anopheles gambiae smurf protein.
          Length = 897

 Score = 23.0 bits (47), Expect = 8.9
 Identities = 12/38 (31%), Positives = 20/38 (52%)
 Frame = -2

Query: 655 EIFSEDSQEIVDIDPMDLRHKLLSLKSTTQKMDVCGPA 542
           EIF E  + I+ + P D+R +L+      + +D  G A
Sbjct: 499 EIFEESYRLIMKMRPKDMRKRLMVKFKGEEGLDYGGVA 536


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 667,098
Number of Sequences: 2352
Number of extensions: 12133
Number of successful extensions: 17
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 17
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 68159265
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)