Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D07
(601 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015619-1|AAH15619.1| 518|Homo sapiens BAIAP2L2 protein protein. 31 3.1
AY358164-1|AAQ88531.1| 529|Homo sapiens APEM9336 protein. 31 3.1
AL031587-3|CAI18966.1| 529|Homo sapiens protein ( udogene simil... 31 3.1
AL022322-1|CAI17932.1| 529|Homo sapiens protein ( Human DNA seq... 31 3.1
BC013888-1|AAH13888.1| 511|Homo sapiens BAI1-associated protein... 31 4.1
AK027142-1|BAB15671.1| 174|Homo sapiens protein ( Homo sapiens ... 31 4.1
AF119666-1|AAF17223.2| 511|Homo sapiens insulin receptor tyrosi... 31 4.1
Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II pro... 29 9.4
X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II prot... 29 9.4
U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein. 29 9.4
BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for IM... 29 9.4
AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta p... 29 9.4
AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II be... 29 9.4
AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, b... 29 9.4
>BC015619-1|AAH15619.1| 518|Homo sapiens BAIAP2L2 protein protein.
Length = 518
Score = 31.1 bits (67), Expect = 3.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 97 FATVKLRKALTNERAAPAI 41
FATVKLR +TN+R+AP I
Sbjct: 499 FATVKLRPTITNDRSAPLI 517
>AY358164-1|AAQ88531.1| 529|Homo sapiens APEM9336 protein.
Length = 529
Score = 31.1 bits (67), Expect = 3.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 97 FATVKLRKALTNERAAPAI 41
FATVKLR +TN+R+AP I
Sbjct: 510 FATVKLRPTITNDRSAPLI 528
>AL031587-3|CAI18966.1| 529|Homo sapiens protein ( udogene similar
to part of ).).
Length = 529
Score = 31.1 bits (67), Expect = 3.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 97 FATVKLRKALTNERAAPAI 41
FATVKLR +TN+R+AP I
Sbjct: 510 FATVKLRPTITNDRSAPLI 528
>AL022322-1|CAI17932.1| 529|Homo sapiens protein ( Human DNA
sequence from clone CTA-228A9 on chromosome
22q12.3-13.32.ontains part of the SLC5A1 gene for solute
carrier family 5 ).
Length = 529
Score = 31.1 bits (67), Expect = 3.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 97 FATVKLRKALTNERAAPAI 41
FATVKLR +TN+R+AP I
Sbjct: 510 FATVKLRPTITNDRSAPLI 528
>BC013888-1|AAH13888.1| 511|Homo sapiens BAI1-associated protein
2-like 1 protein.
Length = 511
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 97 FATVKLRKALTNERAAPAI 41
FATVKLR +TN+R+AP I
Sbjct: 492 FATVKLRPTVTNDRSAPII 510
>AK027142-1|BAB15671.1| 174|Homo sapiens protein ( Homo sapiens
cDNA: FLJ23489 fis, clone LNG00746. ).
Length = 174
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 97 FATVKLRKALTNERAAPAI 41
FATVKLR +TN+R+AP I
Sbjct: 155 FATVKLRPTVTNDRSAPII 173
>AF119666-1|AAF17223.2| 511|Homo sapiens insulin receptor tyrosine
kinase substrate protein.
Length = 511
Score = 30.7 bits (66), Expect = 4.1
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -1
Query: 97 FATVKLRKALTNERAAPAI 41
FATVKLR +TN+R+AP I
Sbjct: 492 FATVKLRPTVTNDRSAPII 510
>Z15115-1|CAA78821.1| 1031|Homo sapiens DNA topoisomerase II
protein.
Length = 1031
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 552 RSEGPYSESDDQKFNEALKQQRPQLLPRTKLLKRAA 445
+ P+S+ D+ K L++ P ++PR LL+RAA
Sbjct: 735 KKRNPWSD-DESKSESDLEETEPVVIPRDSLLRRAA 769
>X68060-1|CAA48197.1| 1621|Homo sapiens DNA topoisomerase II protein.
Length = 1621
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 552 RSEGPYSESDDQKFNEALKQQRPQLLPRTKLLKRAA 445
+ P+S+ D+ K L++ P ++PR LL+RAA
Sbjct: 1325 KKRNPWSD-DESKSESDLEETEPVVIPRDSLLRRAA 1359
>U54831-1|AAB01982.1| 350|Homo sapiens topoisomerase IIb protein.
Length = 350
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 552 RSEGPYSESDDQKFNEALKQQRPQLLPRTKLLKRAA 445
+ P+S+ D+ K L++ P ++PR LL+RAA
Sbjct: 54 KKRNPWSD-DESKSESDLEETEPVVIPRDSLLRRAA 88
>BC021863-1|AAH21863.1| 485|Homo sapiens Unknown (protein for
IMAGE:4999541) protein.
Length = 485
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 552 RSEGPYSESDDQKFNEALKQQRPQLLPRTKLLKRAA 445
+ P+S+ D+ K L++ P ++PR LL+RAA
Sbjct: 189 KKRNPWSD-DESKSESDLEETEPVVIPRDSLLRRAA 223
>AJ011721-1|CAA09753.1| 717|Homo sapiens topoisomerase II beta
protein.
Length = 717
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 552 RSEGPYSESDDQKFNEALKQQRPQLLPRTKLLKRAA 445
+ P+S+ D+ K L++ P ++PR LL+RAA
Sbjct: 421 KKRNPWSD-DESKSESDLEETEPVVIPRDSLLRRAA 455
>AF087160-1|AAC77432.1| 1598|Homo sapiens DNA topoisomerase II beta
protein.
Length = 1598
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 552 RSEGPYSESDDQKFNEALKQQRPQLLPRTKLLKRAA 445
+ P+S+ D+ K L++ P ++PR LL+RAA
Sbjct: 1302 KKRNPWSD-DESKSESDLEETEPVVIPRDSLLRRAA 1336
>AB208879-1|BAD92116.1| 1009|Homo sapiens DNA topoisomerase II, beta
isozyme variant protein.
Length = 1009
Score = 29.5 bits (63), Expect = 9.4
Identities = 13/36 (36%), Positives = 22/36 (61%)
Frame = -2
Query: 552 RSEGPYSESDDQKFNEALKQQRPQLLPRTKLLKRAA 445
+ P+S+ D+ K L++ P ++PR LL+RAA
Sbjct: 713 KKRNPWSD-DESKSESDLEETEPVVIPRDSLLRRAA 747
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 70,834,384
Number of Sequences: 237096
Number of extensions: 1242067
Number of successful extensions: 3045
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 2982
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3043
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 6297951520
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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