Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D05
(649 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_08_0258 + 16261454-16261540,16261636-16261712,16262734-162628... 75 5e-14
02_05_1230 - 35099942-35100018,35100138-35100221,35100367-351004... 74 9e-14
09_02_0075 + 3916373-3916400,3916760-3916858,3916943-3917116,391... 64 9e-11
01_01_0071 + 548255-548399,548478-548651,548787-548892,548992-54... 60 1e-09
12_01_0194 + 1441406-1441726,1442416-1442559,1443172-1443666 33 0.26
11_06_0692 + 26327487-26328509 32 0.34
10_08_1013 - 22239396-22239536,22240629-22240715,22240787-22241131 32 0.34
05_05_0219 + 23371561-23371680,23371799-23372207,23374520-233746... 32 0.45
11_08_0080 - 28208043-28208138,28208187-28208257,28208300-282086... 31 1.0
07_01_0123 - 927691-929223,930050-930268 31 1.0
01_01_0874 - 6840708-6840947,6841063-6841149,6841217-6841281,684... 31 1.0
03_04_0084 - 17153428-17153502,17154158-17154433 30 1.4
06_03_0854 + 25400855-25403741,25406174-25407708 30 1.8
01_05_0230 + 19543410-19543722,19544165-19544238 30 1.8
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 29 2.4
02_04_0001 - 18816492-18816741,18816881-18817050,18817244-188173... 29 2.4
05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594 29 3.2
04_03_0926 - 20861383-20862198,20862359-20862430,20862938-208631... 29 3.2
05_04_0356 - 20584212-20584628,20584798-20584899,20585658-205857... 29 4.2
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 29 4.2
01_07_0179 - 41814886-41815074,41815172-41815222,41815365-418154... 29 4.2
12_02_0448 - 19163172-19163258,19163701-19163919 28 5.6
12_01_1043 + 10731454-10732131 28 5.6
04_03_0786 - 19621674-19621960,19623152-19623193,19623679-19624339 28 5.6
04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076 28 5.6
01_05_0035 + 17440828-17441364 28 5.6
01_01_0663 - 5059881-5060119,5060682-5060898,5061008-5061838,506... 28 5.6
12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232 28 7.4
10_08_0982 - 22025279-22027277,22030256-22030488,22031205-220313... 28 7.4
07_03_0890 - 22332768-22333382 28 7.4
03_02_0400 - 8135283-8135490,8136047-8136213,8136289-8136477,813... 28 7.4
03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,662... 28 7.4
02_04_0521 - 23631951-23633810 28 7.4
02_03_0039 - 14228876-14228878,14229578-14229727,14230457-142306... 28 7.4
02_01_0606 + 4543031-4543177,4543287-4543709,4543836-4543952,454... 28 7.4
08_02_1012 + 23550314-23551504 27 9.7
08_01_1000 + 10154024-10154147,10155500-10155761,10155839-101558... 27 9.7
08_01_0694 - 6136025-6136749,6137425-6137971 27 9.7
07_03_1384 + 26177053-26177227,26178754-26178823,26179427-261794... 27 9.7
07_03_0007 - 12271560-12272207 27 9.7
07_01_0789 - 6150257-6151046,6151167-6151390,6151816-6151991,615... 27 9.7
07_01_0252 + 1883709-1885306,1886338-1886466,1887319-1887341,188... 27 9.7
01_06_0553 + 30173964-30174349,30175124-30175439,30175523-301756... 27 9.7
>10_08_0258 +
16261454-16261540,16261636-16261712,16262734-16262818,
16262931-16263057,16263147-16263245,16263343-16263410,
16263514-16263621,16263727-16263804,16263921-16264053,
16264138-16264234,16264465-16264588,16264668-16264776,
16264899-16264982,16265071-16265180
Length = 461
Score = 74.9 bits (176), Expect = 5e-14
Identities = 39/79 (49%), Positives = 49/79 (62%), Gaps = 2/79 (2%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF +Q + C K L LD +K+NVNGGA ALGHPLGA+G+R + L++E
Sbjct: 358 EINEAFASQYVYCCKKLGLDPAKVNVNGGAMALGHPLGATGARSVSTLLNEMKRRGKDCR 417
Query: 469 VG--SACIGGGQGIALMIE 419
G S CIG G G A + E
Sbjct: 418 FGVISMCIGSGMGAAAVFE 436
>02_05_1230 -
35099942-35100018,35100138-35100221,35100367-35100475,
35100564-35100687,35101157-35101253,35101375-35101507,
35101654-35101731,35101821-35101928,35102011-35102078,
35102181-35102279,35102379-35102505,35102623-35102707,
35103297-35103373,35103482-35103562
Length = 448
Score = 74.1 bits (174), Expect = 9e-14
Identities = 38/79 (48%), Positives = 48/79 (60%), Gaps = 2/79 (2%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
E+ EAF +Q + C L LD SK+NVNGGA ALGHPLGA+G+R A L++E
Sbjct: 356 ELNEAFASQFVYCCNKLGLDRSKVNVNGGAIALGHPLGATGARCVATLLNEMKRRGRDCR 415
Query: 469 VG--SACIGGGQGIALMIE 419
G + CIG G G A + E
Sbjct: 416 FGVVTMCIGSGMGAAAVFE 434
>09_02_0075 +
3916373-3916400,3916760-3916858,3916943-3917116,
3917207-3917312,3917671-3917809,3918457-3918534,
3918863-3918928,3919213-3919298,3919939-3920038,
3920245-3920355,3920457-3920498,3920671-3920757,
3921013-3921102
Length = 401
Score = 64.1 bits (149), Expect = 9e-11
Identities = 35/77 (45%), Positives = 44/77 (57%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF A L+ K L + K+NV+GGA +LGHPLG SG+RI L+ G
Sbjct: 323 EINEAFSAVALANQKLLGIPSEKINVHGGAVSLGHPLGCSGARILVTLLGVLREKGGKIG 382
Query: 469 VGSACIGGGQGIALMIE 419
V C GGG AL++E
Sbjct: 383 VAGVCNGGGGASALVLE 399
>01_01_0071 +
548255-548399,548478-548651,548787-548892,548992-549130,
549216-549293,549395-549460,550061-550201,550417-550527,
550614-550655,550739-550825,551033-551118,551681-551684
Length = 392
Score = 60.5 bits (140), Expect = 1e-09
Identities = 32/79 (40%), Positives = 43/79 (54%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF L+ K L + KLN++GG +LGHP+G SG+RI L+ G
Sbjct: 314 EINEAFSVVALANQKLLGIPSGKLNLSGGGVSLGHPIGCSGARIIVTLLGILRHKNGKIG 373
Query: 469 VGSACIGGGQGIALMIETV 413
V C GGG AL++E +
Sbjct: 374 VAGVCNGGGGASALVVELI 392
>12_01_0194 + 1441406-1441726,1442416-1442559,1443172-1443666
Length = 319
Score = 32.7 bits (71), Expect = 0.26
Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 3/46 (6%)
Frame = +2
Query: 461 RPHPAPQPAPSELVHEVRRDPGAGGAERVS---QRGGASVDVQLAH 589
RP P P+P+ E + + R AG AE S +RG ++VQL H
Sbjct: 236 RPRPRPRPSTRETLSNMGRIEEAGQAEEPSYPRERGDGWLEVQLGH 281
>11_06_0692 + 26327487-26328509
Length = 340
Score = 32.3 bits (70), Expect = 0.34
Identities = 26/94 (27%), Positives = 39/94 (41%), Gaps = 1/94 (1%)
Frame = +2
Query: 365 FTS*LLLVSTSRGGRSNSLDHEGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAER 544
F LL S S GG+++ D PP + P P+P PAP+ R GA R
Sbjct: 217 FLKDLLHRSKSDGGKNHHHDTAPPPPPPKRSPSPSPSPSPAPA--AASARGGRGAATGRR 274
Query: 545 VSQRGGASVDVQLAHVELQRLGTRQRLSH-EGLV 643
+R + E + + R L + +GL+
Sbjct: 275 SRRRSAHERLYEARRAEAEEMRRRTYLPYRQGLL 308
>10_08_1013 - 22239396-22239536,22240629-22240715,22240787-22241131
Length = 190
Score = 32.3 bits (70), Expect = 0.34
Identities = 19/69 (27%), Positives = 31/69 (44%), Gaps = 6/69 (8%)
Frame = +2
Query: 446 PADAGRPHPAPQPAPSELVHEVRRDP------GAGGAERVSQRGGASVDVQLAHVELQRL 607
PA P P P PAP V ++ P G G R + + +D++L +E+
Sbjct: 13 PAPPPPPTPPPPPAPPANVIDLTSSPDASTTKGGGSGNRTKRAPPSLLDIELDGIEMWTP 72
Query: 608 GTRQRLSHE 634
G ++RL +
Sbjct: 73 GQKRRLDED 81
>05_05_0219 +
23371561-23371680,23371799-23372207,23374520-23374635,
23375385-23375855
Length = 371
Score = 31.9 bits (69), Expect = 0.45
Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
Frame = +2
Query: 386 VSTSRGGRSNSLDHEGDALPPADAGRPHPAPQ-PAPSELVHEVRRDPGAGGAER 544
VS S+G + ++ ++ G +PP DA + P P+ P P+ ++ GAGG ++
Sbjct: 92 VSESKGQKGDAGNNSGHPVPPTDAHKTSPPPEGPGPT---GGKEQEGGAGGEKK 142
>11_08_0080 -
28208043-28208138,28208187-28208257,28208300-28208603,
28210483-28211544
Length = 510
Score = 30.7 bits (66), Expect = 1.0
Identities = 14/44 (31%), Positives = 24/44 (54%)
Frame = +2
Query: 449 ADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQ 580
+D+G P+P+P P+P+ + P GG V + G + D+Q
Sbjct: 353 SDSGAPNPSPNPSPNP---SPKPAPSGGGKWCVPKAGASDTDLQ 393
>07_01_0123 - 927691-929223,930050-930268
Length = 583
Score = 30.7 bits (66), Expect = 1.0
Identities = 13/31 (41%), Positives = 17/31 (54%)
Frame = +2
Query: 476 PQPAPSELVHEVRRDPGAGGAERVSQRGGAS 568
P P+ ++ HEVRR P A G + GG S
Sbjct: 8 PYPSSDDVRHEVRRKPSAAGDGAAKEAGGDS 38
>01_01_0874 -
6840708-6840947,6841063-6841149,6841217-6841281,
6841976-6842096,6842207-6842350
Length = 218
Score = 30.7 bits (66), Expect = 1.0
Identities = 17/37 (45%), Positives = 20/37 (54%)
Frame = +2
Query: 458 GRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGAS 568
GRP P P AP+E+V DP A GA R + G S
Sbjct: 4 GRPKPTPVNAPAEVVF----DPSAPGARRPRRPGAPS 36
>03_04_0084 - 17153428-17153502,17154158-17154433
Length = 116
Score = 30.3 bits (65), Expect = 1.4
Identities = 15/39 (38%), Positives = 17/39 (43%)
Frame = +2
Query: 437 ALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQ 553
A PA A P PAP PAP+ V P A+ Q
Sbjct: 27 AAKPAPAAAPAPAPAPAPAAAVAAPAEKPSPAKADATKQ 65
>06_03_0854 + 25400855-25403741,25406174-25407708
Length = 1473
Score = 29.9 bits (64), Expect = 1.8
Identities = 22/77 (28%), Positives = 30/77 (38%), Gaps = 1/77 (1%)
Frame = +2
Query: 383 LVSTSRGGRSNSLDHEGDAL-PPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRG 559
L S + +L E DAL PA + AP PAP+ E P +S G
Sbjct: 392 LAPASAAAHAPALSVEPDALVSPASIAPAYAAPAPAPAPAALEALAPPPPAAPASLSASG 451
Query: 560 GASVDVQLAHVELQRLG 610
G V +A+ + G
Sbjct: 452 GERGCVAIANAAVAGRG 468
>01_05_0230 + 19543410-19543722,19544165-19544238
Length = 128
Score = 29.9 bits (64), Expect = 1.8
Identities = 18/45 (40%), Positives = 19/45 (42%), Gaps = 5/45 (11%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDPG-----AGGAERVSQRGG 562
PPA P PA P P RR G AGG+ R RGG
Sbjct: 62 PPAPPSTPPPASPPTPLSSTESGRRGEGRGSNAAGGSRRRRVRGG 106
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 29.5 bits (63), Expect = 2.4
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +2
Query: 440 LPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQ 553
LP A +P P P P P GAGGAE Q
Sbjct: 91 LPRACNSKPKPPPPPPPERPRRRAAAGGGAGGAEESPQ 128
>02_04_0001 -
18816492-18816741,18816881-18817050,18817244-18817388,
18817495-18817565,18817910-18817993,18818103-18818222,
18818310-18818480,18818955-18819044,18821893-18821985,
18822073-18822405
Length = 508
Score = 29.5 bits (63), Expect = 2.4
Identities = 26/70 (37%), Positives = 31/70 (44%), Gaps = 8/70 (11%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALPPA--DAGRPHPAPQPAPSEL---VHE-VRRDPGAG--GAER 544
STS + + D A P D P P P P PS + HE R PG G GA+R
Sbjct: 21 STSSAAAAAAADASIPAPPEGAGDVSPPSPPPPPPPSSVQSRAHERAREQPGDGGRGADR 80
Query: 545 VSQRGGASVD 574
S A+VD
Sbjct: 81 -SSSAAAAVD 89
>05_03_0002 - 7278527-7279675,7279768-7280325,7280433-7280594
Length = 622
Score = 29.1 bits (62), Expect = 3.2
Identities = 22/60 (36%), Positives = 26/60 (43%), Gaps = 3/60 (5%)
Frame = +2
Query: 401 GGRSNSL--DHEGDALPPADAGRPHPAPQPAPSELVH-EVRRDPGAGGAERVSQRGGASV 571
GG SL D E + D P P QP+P L H P A RV +RGG +V
Sbjct: 10 GGEVPSLLPDVEVTNVASFDVTAPSPRSQPSPRPLPHPNTPTRPRAPSLVRVPRRGGEAV 69
>04_03_0926 -
20861383-20862198,20862359-20862430,20862938-20863123,
20863214-20863304,20863698-20863852,20864501-20864579,
20866797-20867263
Length = 621
Score = 29.1 bits (62), Expect = 3.2
Identities = 15/31 (48%), Positives = 18/31 (58%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDPGAGG 535
P A A RP PAP+ E+ EV+ DPG G
Sbjct: 77 PAAAAPRP-PAPEVVAREVEVEVKADPGPSG 106
>05_04_0356 -
20584212-20584628,20584798-20584899,20585658-20585705,
20586046-20586186,20586315-20586437,20587166-20587252,
20587630-20587742,20587844-20587943,20588217-20588601,
20588841-20588917,20589501-20589593,20589697-20589774,
20590923-20591246
Length = 695
Score = 28.7 bits (61), Expect = 4.2
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRD 520
PPA A +P AP P PS H D
Sbjct: 90 PPAAAAQPAVAPLPGPSGATHPTEND 115
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 28.7 bits (61), Expect = 4.2
Identities = 17/54 (31%), Positives = 24/54 (44%), Gaps = 1/54 (1%)
Frame = +2
Query: 458 GRPHPAPQPAP-SELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGTR 616
G P PAP PAP + + + +G ER++ V V + R GTR
Sbjct: 137 GAPAPAPAPAPAARRIQDEGAARSSGTVERIASTEVVRVQPPAPPVAVSRSGTR 190
>01_07_0179 -
41814886-41815074,41815172-41815222,41815365-41815469,
41815852-41815945,41816056-41816150,41816581-41816700,
41816737-41816832,41817272-41817569,41817777-41817853,
41818932-41819447
Length = 546
Score = 28.7 bits (61), Expect = 4.2
Identities = 21/74 (28%), Positives = 30/74 (40%), Gaps = 4/74 (5%)
Frame = +2
Query: 440 LPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHV----ELQRL 607
LP AD +P P P E + V R A G R+S+ ++ L H EL R+
Sbjct: 21 LPQADPASGGGSPAPTPEEEMERVFRKFDANGDGRISRSELGALFESLGHAATDDELARM 80
Query: 608 GTRQRLSHEGLVDL 649
+G + L
Sbjct: 81 MAEADADGDGFISL 94
>12_02_0448 - 19163172-19163258,19163701-19163919
Length = 101
Score = 28.3 bits (60), Expect = 5.6
Identities = 15/44 (34%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
Frame = +2
Query: 395 SRGGRSNSLDHE-GDALPPADAGRPHPAPQPAPSELVHEVRRDP 523
S GG +SL + G P A +P P +PAPS +++ P
Sbjct: 6 SSGGGQSSLGYLFGGGEAPKSAEKPAPVQKPAPSSSAEKLKEIP 49
>12_01_1043 + 10731454-10732131
Length = 225
Score = 28.3 bits (60), Expect = 5.6
Identities = 16/39 (41%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 395 SRGGRSNSLDHEGD---ALPPADAGRPHPAPQPAPSELV 502
SR G S+ H G +PP + P P P PAP+ LV
Sbjct: 24 SRAGPSSKHGHGGGHAKRVPPPASVPPPPPPPPAPAALV 62
>04_03_0786 - 19621674-19621960,19623152-19623193,19623679-19624339
Length = 329
Score = 28.3 bits (60), Expect = 5.6
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = +2
Query: 437 ALPPADAGRPHPAPQPAPSELVHEVRRDP 523
A PA A P PAP PA L E + DP
Sbjct: 198 ATTPAAAPAPPPAPAPAVPVLTSEKKSDP 226
>04_01_0001 + 48461-48625,49314-50491,50620-50816,50896-52076
Length = 906
Score = 28.3 bits (60), Expect = 5.6
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 437 ALPPADAGRPHPAPQPAPSELVHEVRRDP 523
A PP AG P PAP P P H P
Sbjct: 274 AAPPPPAGPPPPAPPPLPPSHHHHHGHHP 302
>01_05_0035 + 17440828-17441364
Length = 178
Score = 28.3 bits (60), Expect = 5.6
Identities = 11/23 (47%), Positives = 16/23 (69%)
Frame = +2
Query: 464 PHPAPQPAPSELVHEVRRDPGAG 532
P P+P P+ +E +H + R PGAG
Sbjct: 32 PPPSPLPSSAEPLHGLCRKPGAG 54
>01_01_0663 -
5059881-5060119,5060682-5060898,5061008-5061838,
5063560-5064120
Length = 615
Score = 28.3 bits (60), Expect = 5.6
Identities = 18/62 (29%), Positives = 26/62 (41%)
Frame = +2
Query: 410 SNSLDHEGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAH 589
S L +GD + G+P P + L RRDP G A G S+ +L +
Sbjct: 373 SKRLTKQGDYFGVTEEGKPSPKDRLCIEILEQAERRDPQLGEASVSLAMAGESLRGRLLY 432
Query: 590 VE 595
+E
Sbjct: 433 LE 434
>12_01_0477 + 3742751-3745200,3747192-3747502,3747886-3748232
Length = 1035
Score = 27.9 bits (59), Expect = 7.4
Identities = 18/58 (31%), Positives = 25/58 (43%), Gaps = 1/58 (1%)
Frame = +2
Query: 440 LPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLA-HVELQRLG 610
LPP + P P P P+PS H R GA R R + + ++ V + R G
Sbjct: 4 LPPLPSPPPPPTPPPSPSNRNH--RHPASRVGAARGGPRSDPATPIPVSPRVSVMRRG 59
>10_08_0982 -
22025279-22027277,22030256-22030488,22031205-22031344,
22032783-22032957
Length = 848
Score = 27.9 bits (59), Expect = 7.4
Identities = 19/57 (33%), Positives = 22/57 (38%)
Frame = +2
Query: 464 PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGTRQRLSHE 634
P P P P S L+ P A G GG +DV H E GT + HE
Sbjct: 4 PLPFPVPCRSSLLPLSTPPPTAVGPHHEIATGGVGIDV-WRHEETAVEGTEEENEHE 59
>07_03_0890 - 22332768-22333382
Length = 204
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/27 (44%), Positives = 13/27 (48%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDP 523
PPA+A P P P P P V E P
Sbjct: 78 PPAEATPPPPPPPPPPERAVPEAADTP 104
>03_02_0400 -
8135283-8135490,8136047-8136213,8136289-8136477,
8136560-8136655,8136746-8136874,8136947-8137123,
8137256-8137366,8138592-8138792,8139022-8139186,
8139293-8139527,8139618-8139745,8139833-8139928,
8140017-8140112,8140252-8140325,8140393-8140462,
8140556-8140665,8140753-8140906,8141040-8141155,
8141259-8141379,8141464-8141641,8142331-8142489,
8142619-8142732,8142821-8143000,8143098-8143177
Length = 1117
Score = 27.9 bits (59), Expect = 7.4
Identities = 15/28 (53%), Positives = 16/28 (57%), Gaps = 1/28 (3%)
Frame = -2
Query: 567 EAPPRWDTRSAPPAPGSRRTSC-TSSDG 487
+AP W T A A GSR SC TS DG
Sbjct: 542 DAPGHWCTTMAYSADGSRLFSCGTSKDG 569
>03_02_0234 + 6625417-6626184,6626314-6626339,6626435-6626531,
6627009-6627116,6627194-6627328,6627429-6627528,
6627763-6627974,6628060-6628125,6628231-6628464,
6628583-6628641,6628716-6628782,6628863-6629192,
6629267-6629335,6629417-6629503,6629605-6629692,
6630057-6630178,6630251-6630355,6630442-6630485,
6630558-6630627,6630711-6630814,6630980-6631189,
6632935-6633018,6633291-6634003,6634115-6634649,
6634703-6634789,6634826-6634970,6635049-6635125,
6635215-6635359,6635462-6635626,6635725-6635958
Length = 1761
Score = 27.9 bits (59), Expect = 7.4
Identities = 16/48 (33%), Positives = 22/48 (45%)
Frame = +2
Query: 431 GDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVD 574
G PP G P PAP+ S+ + D G+ S+ GG+S D
Sbjct: 1194 GGGSPPPSHGSP-PAPKAVQSQPAPKRSGDGGSSSDSGSSKEGGSSSD 1240
>02_04_0521 - 23631951-23633810
Length = 619
Score = 27.9 bits (59), Expect = 7.4
Identities = 12/19 (63%), Positives = 13/19 (68%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSEL 499
PPA AG P PAP P+ S L
Sbjct: 68 PPAAAGAPAPAPPPSVSGL 86
>02_03_0039 -
14228876-14228878,14229578-14229727,14230457-14230631,
14231320-14231822
Length = 276
Score = 27.9 bits (59), Expect = 7.4
Identities = 11/25 (44%), Positives = 14/25 (56%)
Frame = +3
Query: 387 CRHHVAAAQTVSIMRAMPCPPPMQA 461
CRH + A+ S+ A P PPP A
Sbjct: 35 CRHGLTASVRASLSTAAPSPPPRPA 59
>02_01_0606 +
4543031-4543177,4543287-4543709,4543836-4543952,
4544064-4544423
Length = 348
Score = 27.9 bits (59), Expect = 7.4
Identities = 22/78 (28%), Positives = 33/78 (42%), Gaps = 9/78 (11%)
Frame = +2
Query: 347 KALQAPFTS*LLLVSTSRGGRSN--SLDHEGDALPPADAGR-------PHPAPQPAPSEL 499
+ALQ+ F+ + + + GG N S EG ++ P+ + P P P P P
Sbjct: 79 EALQSQFSDMVTASANNGGGGGNNPSSTSEGGSVSPSRKRKSESLDDSPPPPPPPHPHAA 138
Query: 500 VHEVRRDPGAGGAERVSQ 553
H + PGA A Q
Sbjct: 139 PHHMHVMPGAAAAGYADQ 156
>08_02_1012 + 23550314-23551504
Length = 396
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/26 (53%), Positives = 14/26 (53%)
Frame = +2
Query: 407 RSNSLDHEGDALPPADAGRPHPAPQP 484
R SLD DA A A RP PAP P
Sbjct: 133 RKASLDSSLDAAAAAAAPRPPPAPSP 158
>08_01_1000 +
10154024-10154147,10155500-10155761,10155839-10155885,
10155967-10155998,10156079-10156146,10156214-10156605,
10156811-10157009,10157494-10157636,10157722-10158366,
10158493-10158551,10158725-10158823
Length = 689
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/49 (28%), Positives = 23/49 (46%)
Frame = +2
Query: 386 VSTSRGGRSNSLDHEGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAG 532
+ +RG S + D+ D +P D G P +P+P + E+ P G
Sbjct: 286 IPNARGSTSTTYDNIEDVIP-MDIGMPDFRIEPSPPRVQDEMNAQPVQG 333
>08_01_0694 - 6136025-6136749,6137425-6137971
Length = 423
Score = 27.5 bits (58), Expect = 9.7
Identities = 14/34 (41%), Positives = 18/34 (52%), Gaps = 2/34 (5%)
Frame = +2
Query: 401 GGRSNSLDHEGDAL--PPADAGRPHPAPQPAPSE 496
GG D E D L PPA + PA +PAP++
Sbjct: 3 GGEYTPADAEADLLLPPPAGSEPDEPAARPAPAD 36
>07_03_1384 +
26177053-26177227,26178754-26178823,26179427-26179469,
26179888-26179965,26180010-26180027,26180103-26180187,
26180273-26180355,26180489-26180546,26181258-26181368,
26181769-26181826,26182005-26182101,26182585-26182620,
26183107-26183137,26183993-26184046,26184159-26184301,
26184411-26184560,26185084-26185317,26185450-26185509,
26185974-26186204,26186829-26186981
Length = 655
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/59 (33%), Positives = 27/59 (45%)
Frame = +2
Query: 470 PAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGTRQRLSHEGLVD 646
P+P+P PS V P AG + RGGA V + L L LG + E +V+
Sbjct: 19 PSPRPPPSTPVSS----PAAGADLHPASRGGAGVLLLLPPHSLTALGIERFAPVERVVE 73
>07_03_0007 - 12271560-12272207
Length = 215
Score = 27.5 bits (58), Expect = 9.7
Identities = 20/74 (27%), Positives = 29/74 (39%), Gaps = 3/74 (4%)
Frame = +2
Query: 437 ALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASV---DVQLAHVELQRL 607
ALP P P P P E V + G E + + A V +V+L H + +
Sbjct: 89 ALPDVLPAEAEPRPAPEPGEPVKKEPEAVDVAGKEELERMSVAEVLRREVELVHPWPEWI 148
Query: 608 GTRQRLSHEGLVDL 649
RL+ + DL
Sbjct: 149 ELMDRLAQQKYFDL 162
>07_01_0789 -
6150257-6151046,6151167-6151390,6151816-6151991,
6152778-6153801
Length = 737
Score = 27.5 bits (58), Expect = 9.7
Identities = 16/39 (41%), Positives = 19/39 (48%), Gaps = 2/39 (5%)
Frame = +2
Query: 401 GGRSNSLDHEGDALPPADAGRPHP--APQPAPSELVHEV 511
GGR D E PP + RP P +P P P E H+V
Sbjct: 163 GGRRGDDDAELKPPPPLPSQRPPPSRSPPPLPPENDHKV 201
>07_01_0252 +
1883709-1885306,1886338-1886466,1887319-1887341,
1887455-1888023
Length = 772
Score = 27.5 bits (58), Expect = 9.7
Identities = 18/47 (38%), Positives = 25/47 (53%), Gaps = 1/47 (2%)
Frame = +2
Query: 512 RRDPGAGGAERVSQRGGASVDVQLAHVELQRLGTR-QRLSHEGLVDL 649
R DP GG V+ RGG V V +A R+G R R + +G+ +L
Sbjct: 58 RVDPCGGGWAGVTCRGGRVVGVTVAGFRRTRVGARAPRFAVDGVRNL 104
>01_06_0553 +
30173964-30174349,30175124-30175439,30175523-30175618,
30175710-30175778,30175878-30176006,30176165-30176264,
30177321-30177454
Length = 409
Score = 27.5 bits (58), Expect = 9.7
Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 3/43 (6%)
Frame = +2
Query: 449 ADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVS---QRGGAS 568
A RP P+P P+PS R P A A R+ GGAS
Sbjct: 19 AKTRRPGPSPSPSPSPASAFARPSPRASAAGRLHASLHLGGAS 61
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,303,948
Number of Sequences: 37544
Number of extensions: 265427
Number of successful extensions: 1883
Number of sequences better than 10.0: 43
Number of HSP's better than 10.0 without gapping: 1582
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1830
length of database: 14,793,348
effective HSP length: 79
effective length of database: 11,827,372
effective search space used: 1608522592
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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