Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D05
         (649 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.         27   0.51 
U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.         27   0.51 
AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein ...    25   2.1  
AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.            23   8.3  

>U42429-1|AAB54088.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 401 GGRSNSLDHEGDALPPADAGRPHPAPQPAPS 493
           G  +N   + G   P      P P P+PAPS
Sbjct: 398 GSATNGASNGGSGAPATAKPTPKPIPKPAPS 428


>U42214-1|AAB58461.1|  596|Anopheles gambiae engrailed protein.
          Length = 596

 Score = 27.1 bits (57), Expect = 0.51
 Identities = 11/31 (35%), Positives = 14/31 (45%)
 Frame = +2

Query: 401 GGRSNSLDHEGDALPPADAGRPHPAPQPAPS 493
           G  +N   + G   P      P P P+PAPS
Sbjct: 398 GSATNGASNGGSGAPATAKPTPKPIPKPAPS 428


>AY263177-1|AAP78792.1|  699|Anopheles gambiae TmcC-like protein
           protein.
          Length = 699

 Score = 25.0 bits (52), Expect = 2.1
 Identities = 8/23 (34%), Positives = 15/23 (65%)
 Frame = -2

Query: 249 FFFSKFFKYIVIHFANYFLMKYF 181
           F   +F+K  ++ FA +FL+ +F
Sbjct: 389 FVGQQFYKLFIVDFATHFLVTFF 411


>AF444783-1|AAL37904.1| 1356|Anopheles gambiae Trex protein.
          Length = 1356

 Score = 23.0 bits (47), Expect = 8.3
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +2

Query: 437  ALPPADAGRPHPAPQPAP 490
            A  PADA +  PA +P P
Sbjct: 963  ATQPADASQASPAEEPLP 980


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,693
Number of Sequences: 2352
Number of extensions: 8687
Number of successful extensions: 35
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 35
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 63977715
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)