BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D05
(649 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D16294-1|BAA03800.1| 397|Homo sapiens mitochondrial 3-oxoacyl-C... 105 1e-22
BC001918-1|AAH01918.1| 397|Homo sapiens acetyl-Coenzyme A acylt... 105 1e-22
S70154-1|AAB30856.1| 397|Homo sapiens cytosolic acetoacetyl-coe... 77 5e-14
BC000408-1|AAH00408.1| 397|Homo sapiens ACAT2 protein protein. 77 5e-14
AL135914-6|CAI21850.1| 397|Homo sapiens acetyl-Coenzyme A acety... 77 5e-14
AF356877-1|AAM00223.1| 397|Homo sapiens acetyl CoA transferase-... 77 5e-14
AB208993-1|BAD92230.1| 404|Homo sapiens Acetyl-CoA acetyltransf... 77 5e-14
D90228-1|BAA14278.1| 427|Homo sapiens mitochondrial acetoacetyl... 69 1e-11
D10511-1|BAA01387.1| 427|Homo sapiens mitochondrial acetoacetyl... 67 4e-11
X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA... 62 2e-09
X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase pr... 62 2e-09
X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRN... 62 2e-09
X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for ... 62 2e-09
BC014474-1|AAH14474.1| 331|Homo sapiens ACAA1 protein protein. 62 2e-09
BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 62 2e-09
BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A acylt... 62 2e-09
D86850-1|BAA22061.1| 410|Homo sapiens 3-ketoacyl-CoA thiolase b... 45 3e-04
D16481-1|BAA03942.1| 474|Homo sapiens 3-ketoacyl-CoA thiolase b... 45 3e-04
BC066963-1|AAH66963.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 45 3e-04
BC030824-1|AAH30824.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 45 3e-04
BC017564-1|AAH17564.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 45 3e-04
BC014572-1|AAH14572.1| 475|Homo sapiens hydroxyacyl-Coenzyme A ... 45 3e-04
AC010896-2|AAY14644.1| 474|Homo sapiens unknown protein. 45 3e-04
AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein. 35 0.29
AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein pro... 35 0.29
AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein pro... 35 0.29
AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein. 35 0.29
BC063489-1|AAH63489.1| 301|Homo sapiens transmembrane and ubiqu... 32 1.5
BC009062-1|AAH09062.1| 198|Homo sapiens Unknown (protein for IM... 32 1.5
AY358780-1|AAQ89140.1| 301|Homo sapiens ELSD1897 protein. 32 1.5
AK021759-1|BAB13886.1| 181|Homo sapiens protein ( Homo sapiens ... 32 1.5
AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein. 31 2.7
AK128330-1|BAC87387.1| 686|Homo sapiens protein ( Homo sapiens ... 31 3.5
AK127740-1|BAC87109.1| 218|Homo sapiens protein ( Homo sapiens ... 31 4.7
BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine phosph... 30 6.2
BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine phosph... 30 6.2
BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein. 30 6.2
BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein. 30 6.2
AK127045-1|BAC86801.1| 1173|Homo sapiens HO-GEF). protein. 30 6.2
AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosph... 30 6.2
AB040904-1|BAA95995.2| 1421|Homo sapiens KIAA1471 protein protein. 30 6.2
AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosph... 30 6.2
Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein. 30 8.2
U23460-1|AAC99802.1| 664|Homo sapiens proline rich calmodulin-d... 30 8.2
D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein pro... 30 8.2
BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein. 30 8.2
BC077721-1|AAH77721.1| 1030|Homo sapiens ARHGEF18 protein protein. 30 8.2
BC070272-1|AAH70272.1| 223|Homo sapiens chromosome 17 open read... 30 8.2
BC018880-1|AAH18880.1| 223|Homo sapiens chromosome 17 open read... 30 8.2
BC009261-1|AAH09261.1| 223|Homo sapiens chromosome 17 open read... 30 8.2
BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein. 30 8.2
BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein. 30 8.2
AL365502-2|CAI14576.1| 145|Homo sapiens nasal embryonic LHRH fa... 30 8.2
AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein pr... 30 8.2
AK222506-1|BAD96226.1| 223|Homo sapiens hypothetical protein FL... 30 8.2
AK000021-1|BAA90889.1| 223|Homo sapiens protein ( Homo sapiens ... 30 8.2
AB011093-1|BAA25447.1| 1050|Homo sapiens KIAA0521 protein protein. 30 8.2
>D16294-1|BAA03800.1| 397|Homo sapiens mitochondrial 3-oxoacyl-CoA
thiolase protein.
Length = 397
Score = 105 bits (252), Expect = 1e-22
Identities = 50/78 (64%), Positives = 59/78 (75%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
E+ EAF Q L+ ++L LD+SK NVNGGA ALGHPLG SGSRITAHLVHE
Sbjct: 318 EVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGKYA 377
Query: 469 VGSACIGGGQGIALMIET 416
VGSACIGGGQGIA++I++
Sbjct: 378 VGSACIGGGQGIAVIIQS 395
>BC001918-1|AAH01918.1| 397|Homo sapiens acetyl-Coenzyme A
acyltransferase 2 (mitochondrial 3-oxoacyl-Coenzyme A
thiolas protein.
Length = 397
Score = 105 bits (252), Expect = 1e-22
Identities = 50/78 (64%), Positives = 59/78 (75%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
E+ EAF Q L+ ++L LD+SK NVNGGA ALGHPLG SGSRITAHLVHE
Sbjct: 318 EVNEAFAPQYLAVERSLDLDISKTNVNGGAIALGHPLGGSGSRITAHLVHELRRRGGKYA 377
Query: 469 VGSACIGGGQGIALMIET 416
VGSACIGGGQGIA++I++
Sbjct: 378 VGSACIGGGQGIAVIIQS 395
>S70154-1|AAB30856.1| 397|Homo sapiens cytosolic
acetoacetyl-coenzyme A thiolase protein.
Length = 397
Score = 77.0 bits (181), Expect = 5e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF A + + K L L+ K+N+ GGA ALGHPLGASG RI L+H G
Sbjct: 319 EINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRG 378
Query: 469 VGSACIGGGQGIALMIE 419
V + CIGGG GIA+ ++
Sbjct: 379 VAALCIGGGMGIAMCVQ 395
>BC000408-1|AAH00408.1| 397|Homo sapiens ACAT2 protein protein.
Length = 397
Score = 77.0 bits (181), Expect = 5e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF A + + K L L+ K+N+ GGA ALGHPLGASG RI L+H G
Sbjct: 319 EINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRG 378
Query: 469 VGSACIGGGQGIALMIE 419
V + CIGGG GIA+ ++
Sbjct: 379 VAALCIGGGMGIAMCVQ 395
>AL135914-6|CAI21850.1| 397|Homo sapiens acetyl-Coenzyme A
acetyltransferase 2 (acetoacetyl Coenzyme A thiolase)
protein.
Length = 397
Score = 77.0 bits (181), Expect = 5e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF A + + K L L+ K+N+ GGA ALGHPLGASG RI L+H G
Sbjct: 319 EINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRG 378
Query: 469 VGSACIGGGQGIALMIE 419
V + CIGGG GIA+ ++
Sbjct: 379 VAALCIGGGMGIAMCVQ 395
>AF356877-1|AAM00223.1| 397|Homo sapiens acetyl CoA
transferase-like protein protein.
Length = 397
Score = 77.0 bits (181), Expect = 5e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF A + + K L L+ K+N+ GGA ALGHPLGASG RI L+H G
Sbjct: 319 EINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGGSRG 378
Query: 469 VGSACIGGGQGIALMIE 419
V + CIGGG GIA+ ++
Sbjct: 379 VAALCIGGGMGIAMCVQ 395
>AB208993-1|BAD92230.1| 404|Homo sapiens Acetyl-CoA
acetyltransferase, cytosolic variant protein.
Length = 404
Score = 77.0 bits (181), Expect = 5e-14
Identities = 38/77 (49%), Positives = 48/77 (62%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
EI EAF A + + K L L+ K+N+ GGA ALGHPLGASG RI L+H G
Sbjct: 326 EINEAFAAVSAAIVKELGLNPEKVNIEGGAIALGHPLGASGCRILVTLLHTLERMGRSRG 385
Query: 469 VGSACIGGGQGIALMIE 419
V + CIGGG GIA+ ++
Sbjct: 386 VAALCIGGGMGIAMCVQ 402
>D90228-1|BAA14278.1| 427|Homo sapiens mitochondrial
acetoacetyl-CoA thiolase precursor protein.
Length = 427
Score = 68.9 bits (161), Expect = 1e-11
Identities = 34/77 (44%), Positives = 47/77 (61%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
E+ EAF L+ K L++D K+N+NGGA +LGHP+G SG+RI HL H G
Sbjct: 351 EVNEAFSLVVLANIKMLEIDPQKVNINGGAVSLGHPIGMSGARIVGHLTH--ALKQGEYG 408
Query: 469 VGSACIGGGQGIALMIE 419
+ S C GGG A++I+
Sbjct: 409 LASICNGGGGASAMLIQ 425
>D10511-1|BAA01387.1| 427|Homo sapiens mitochondrial
acetoacetyl-CoA thiolase protein.
Length = 427
Score = 67.3 bits (157), Expect = 4e-11
Identities = 33/77 (42%), Positives = 47/77 (61%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
E+ EAF L+ K L++D K+N+NGG+ +LGHP+G SG+RI HL H G
Sbjct: 351 EVNEAFSLVVLANIKMLEIDPQKVNINGGSVSLGHPIGMSGARIVGHLTH--ALKQGEYG 408
Query: 469 VGSACIGGGQGIALMIE 419
+ S C GGG A++I+
Sbjct: 409 LASFCNGGGGASAMLIQ 425
>X65140-1|CAA46270.1| 424|Homo sapiens peroxisomal 3-oxoacyl-CoA
thiolase protein.
Length = 424
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHE-XXXXXXXX 473
EI EAF +Q C + L+L K+N GGA ALGHPLG +G+R L++E
Sbjct: 343 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAY 402
Query: 472 GVGSACIGGGQGIALMIE 419
GV S CIG G G A + E
Sbjct: 403 GVVSMCIGTGMGAAAVFE 420
>X51460-1|CAA35825.1| 326|Homo sapiens 3-oxoacyl-CoA thiolase
protein.
Length = 326
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHE-XXXXXXXX 473
EI EAF +Q C + L+L K+N GGA ALGHPLG +G+R L++E
Sbjct: 245 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAY 304
Query: 472 GVGSACIGGGQGIALMIE 419
GV S CIG G G A + E
Sbjct: 305 GVVSMCIGTGMGAAAVFE 322
>X14813-1|CAA32918.1| 424|Homo sapiens protein ( Human liver mRNA
for 3-oxoacyl-CoA thiolase. ).
Length = 424
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHE-XXXXXXXX 473
EI EAF +Q C + L+L K+N GGA ALGHPLG +G+R L++E
Sbjct: 343 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAY 402
Query: 472 GVGSACIGGGQGIALMIE 419
GV S CIG G G A + E
Sbjct: 403 GVVSMCIGTGMGAAAVFE 420
>X12966-1|CAA31412.1| 424|Homo sapiens protein ( Human mRNA for
3-oxoacyl-CoA peroxisomal thiolase. ).
Length = 424
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHE-XXXXXXXX 473
EI EAF +Q C + L+L K+N GGA ALGHPLG +G+R L++E
Sbjct: 343 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAY 402
Query: 472 GVGSACIGGGQGIALMIE 419
GV S CIG G G A + E
Sbjct: 403 GVVSMCIGTGMGAAAVFE 420
>BC014474-1|AAH14474.1| 331|Homo sapiens ACAA1 protein protein.
Length = 331
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHE-XXXXXXXX 473
EI EAF +Q C + L+L K+N GGA ALGHPLG +G+R L++E
Sbjct: 250 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQAITLLNELKRRGKRAY 309
Query: 472 GVGSACIGGGQGIALMIE 419
GV S CIG G G A + E
Sbjct: 310 GVVSMCIGTGMGAAAVFE 327
>BC011977-1|AAH11977.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHE-XXXXXXXX 473
EI EAF +Q C + L+L K+N GGA ALGHPLG +G+R L++E
Sbjct: 343 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAY 402
Query: 472 GVGSACIGGGQGIALMIE 419
GV S CIG G G A + E
Sbjct: 403 GVVSMCIGTGMGAAAVFE 420
>BC000635-1|AAH00635.1| 424|Homo sapiens acetyl-Coenzyme A
acyltransferase 1 (peroxisomal 3-oxoacyl-Coenzyme A
thiolase) protein.
Length = 424
Score = 62.1 bits (144), Expect = 2e-09
Identities = 35/78 (44%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
Frame = -1
Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHE-XXXXXXXX 473
EI EAF +Q C + L+L K+N GGA ALGHPLG +G+R L++E
Sbjct: 343 EINEAFASQAAYCVEKLRLPPEKVNPLGGAVALGHPLGCTGARQVITLLNELKRRGKRAY 402
Query: 472 GVGSACIGGGQGIALMIE 419
GV S CIG G G A + E
Sbjct: 403 GVVSMCIGTGMGAAAVFE 420
>D86850-1|BAA22061.1| 410|Homo sapiens 3-ketoacyl-CoA thiolase
beta-subunit of mitochondrial trifunctional protein
protein.
Length = 410
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 589 MSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
+ K N GG+ +LGHP GA+G R+ + G+ +AC GGQG A+++E
Sbjct: 350 LEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVE 406
>D16481-1|BAA03942.1| 474|Homo sapiens 3-ketoacyl-CoA thiolase
beta-subunit of trifunctional protein protein.
Length = 474
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 589 MSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
+ K N GG+ +LGHP GA+G R+ + G+ +AC GGQG A+++E
Sbjct: 414 LEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVE 470
>BC066963-1|AAH66963.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 589 MSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
+ K N GG+ +LGHP GA+G R+ + G+ +AC GGQG A+++E
Sbjct: 415 LEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVE 471
>BC030824-1|AAH30824.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 589 MSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
+ K N GG+ +LGHP GA+G R+ + G+ +AC GGQG A+++E
Sbjct: 415 LEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVE 471
>BC017564-1|AAH17564.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 589 MSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
+ K N GG+ +LGHP GA+G R+ + G+ +AC GGQG A+++E
Sbjct: 415 LEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVE 471
>BC014572-1|AAH14572.1| 475|Homo sapiens hydroxyacyl-Coenzyme A
dehydrogenase/3-ketoacyl-Coenzyme A thiolase/enoyl-Coenz
protein.
Length = 475
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 589 MSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
+ K N GG+ +LGHP GA+G R+ + G+ +AC GGQG A+++E
Sbjct: 415 LEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVE 471
>AC010896-2|AAY14644.1| 474|Homo sapiens unknown protein.
Length = 474
Score = 44.8 bits (101), Expect = 3e-04
Identities = 21/57 (36%), Positives = 32/57 (56%)
Frame = -1
Query: 589 MSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
+ K N GG+ +LGHP GA+G R+ + G+ +AC GGQG A+++E
Sbjct: 414 LEKFNNWGGSLSLGHPFGATGCRLVMAAANRLRKEGGQYGLVAACAAGGQGHAMIVE 470
>AC004493-2|AAC08453.1| 1791|Homo sapiens KIAA0324 protein.
Length = 1791
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALP--PADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGG 562
S+S S+S D EG +LP P A + P+P PAP E V E R P A+R +
Sbjct: 1583 SSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE-GRPPEPTPAKRKRRSSS 1641
Query: 563 AS 568
+S
Sbjct: 1642 SS 1643
>AB016092-1|BAA83718.1| 2752|Homo sapiens RNA binding protein protein.
Length = 2752
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALP--PADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGG 562
S+S S+S D EG +LP P A + P+P PAP E V E R P A+R +
Sbjct: 2551 SSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE-GRPPEPTPAKRKRRSSS 2609
Query: 563 AS 568
+S
Sbjct: 2610 SS 2611
>AB016091-1|BAA83717.1| 1275|Homo sapiens RNA binding protein protein.
Length = 1275
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALP--PADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGG 562
S+S S+S D EG +LP P A + P+P PAP E V E R P A+R +
Sbjct: 1074 SSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE-GRPPEPTPAKRKRRSSS 1132
Query: 563 AS 568
+S
Sbjct: 1133 SS 1134
>AB002322-1|BAA20782.3| 2800|Homo sapiens KIAA0324 protein protein.
Length = 2800
Score = 34.7 bits (76), Expect = 0.29
Identities = 24/62 (38%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALP--PADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGG 562
S+S S+S D EG +LP P A + P+P PAP E V E R P A+R +
Sbjct: 2599 SSSSSSGSSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE-GRPPEPTPAKRKRRSSS 2657
Query: 563 AS 568
+S
Sbjct: 2658 SS 2659
>BC063489-1|AAH63489.1| 301|Homo sapiens transmembrane and
ubiquitin-like domain containing 2 protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 449 ADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRG-GASVDVQLAH-VELQRLGTRQ 619
A G P P P PSE E + G G + + G G V+ L H +++Q L RQ
Sbjct: 69 AGQGNPEPTELPHPSEGNDEKAEEAGEGRGDSTGEAGAGGGVEPSLEHLLDIQGLPKRQ 127
>BC009062-1|AAH09062.1| 198|Homo sapiens Unknown (protein for
IMAGE:3875076) protein.
Length = 198
Score = 32.3 bits (70), Expect = 1.5
Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 2/55 (3%)
Frame = +2
Query: 410 SNSLDHEGDALP--PADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGAS 568
S+S D EG +LP P A + P+P PAP E V E R P A+R + +S
Sbjct: 4 SSSSDSEGSSLPVQPEVALKRVPSPTPAPKEAVRE-GRPPEPTPAKRKRRSSSSS 57
>AY358780-1|AAQ89140.1| 301|Homo sapiens ELSD1897 protein.
Length = 301
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 449 ADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRG-GASVDVQLAH-VELQRLGTRQ 619
A G P P P PSE E + G G + + G G V+ L H +++Q L RQ
Sbjct: 69 AGQGNPEPTELPHPSEGNDEKAEEAGEGRGDSTGEAGAGGGVEPSLEHLLDIQGLPKRQ 127
>AK021759-1|BAB13886.1| 181|Homo sapiens protein ( Homo sapiens
cDNA FLJ11697 fis, clone HEMBA1005035. ).
Length = 181
Score = 32.3 bits (70), Expect = 1.5
Identities = 20/59 (33%), Positives = 27/59 (45%), Gaps = 2/59 (3%)
Frame = +2
Query: 449 ADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRG-GASVDVQLAH-VELQRLGTRQ 619
A G P P P PSE E + G G + + G G V+ L H +++Q L RQ
Sbjct: 69 AGQGNPEPTELPHPSEGNDEKAEEAGEGRGDSTGEAGAGGGVEPSLEHLLDIQGLPKRQ 127
>AB033062-1|BAA86550.2| 1840|Homo sapiens KIAA1236 protein protein.
Length = 1840
Score = 31.5 bits (68), Expect = 2.7
Identities = 15/44 (34%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Frame = +2
Query: 461 RPHPAPQPAPSELVHEVR--RDPGAGGAERVSQRGGASVDVQLA 586
RP P+P P P +L+ R +PG GG + V++ + Q+A
Sbjct: 904 RPLPSPAPPPPQLLEACRAPEEPGGGGTDGVARTPPVGMSGQVA 947
>AK128330-1|BAC87387.1| 686|Homo sapiens protein ( Homo sapiens
cDNA FLJ46472 fis, clone THYMU3023400. ).
Length = 686
Score = 31.1 bits (67), Expect = 3.5
Identities = 25/82 (30%), Positives = 35/82 (42%)
Frame = +2
Query: 401 GGRSNSLDHEGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQ 580
G + DH G PA+ P P P P E +V R AGG + SQ A
Sbjct: 558 GQPAEDSDHGGKPPLPAEKPAPGPGLPPEPREQ-RDVER---AGGNQAASQLEEAGRAEM 613
Query: 581 LAHVELQRLGTRQRLSHEGLVD 646
L H L ++ Q++ + L+D
Sbjct: 614 LDHAVLLQVIKEQQVQQKRLLD 635
>AK127740-1|BAC87109.1| 218|Homo sapiens protein ( Homo sapiens
cDNA FLJ45840 fis, clone NTONG2004829. ).
Length = 218
Score = 30.7 bits (66), Expect = 4.7
Identities = 17/40 (42%), Positives = 19/40 (47%)
Frame = +2
Query: 377 LLLVSTSRGGRSNSLDHEGDALPPADAGRPHPAPQPAPSE 496
LLL S GG + D A+ PA P PA PA SE
Sbjct: 27 LLLFSHREGGGRGAGDPGAPAVVPAPVSAPRPASSPARSE 66
>BT009758-1|AAP88760.1| 577|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 577
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 13 PSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 72
Query: 614 R 616
+
Sbjct: 73 Q 73
>BC089042-1|AAH89042.1| 1636|Homo sapiens protein tyrosine
phosphatase, non-receptor type 23 protein.
Length = 1636
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 1072 PSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 1131
Query: 614 R 616
+
Sbjct: 1132 Q 1132
>BC027711-1|AAH27711.2| 1320|Homo sapiens PTPN23 protein protein.
Length = 1320
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 756 PSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 815
Query: 614 R 616
+
Sbjct: 816 Q 816
>BC004881-1|AAH04881.2| 619|Homo sapiens PTPN23 protein protein.
Length = 619
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 55 PSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 114
Query: 614 R 616
+
Sbjct: 115 Q 115
>AK127045-1|BAC86801.1| 1173|Homo sapiens HO-GEF). protein.
Length = 1173
Score = 30.3 bits (65), Expect = 6.2
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 STSRGGRSNS--LDHEGDALPPADAGRPHPAPQPAPS 493
STSR RS S L PP D G P P+P PA S
Sbjct: 1094 STSRNRRSLSPILSGRHSPAPPPDPGFPAPSPPPADS 1130
>AF290614-1|AAK28025.1| 1636|Homo sapiens protein tyrosine phosphatase
TD14 protein.
Length = 1636
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 1072 PSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 1131
Query: 614 R 616
+
Sbjct: 1132 Q 1132
>AB040904-1|BAA95995.2| 1421|Homo sapiens KIAA1471 protein protein.
Length = 1421
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 1110 PSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 1169
Query: 614 R 616
+
Sbjct: 1170 Q 1170
>AB025194-1|BAB19280.1| 1636|Homo sapiens protein tyrosine phosphatase
HD-PTP protein.
Length = 1636
Score = 30.3 bits (65), Expect = 6.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 1072 PSSAGQSTPSPHLVPSPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 1131
Query: 614 R 616
+
Sbjct: 1132 Q 1132
>Y09980-1|CAA71102.1| 432|Homo sapiens HOXD3 protein.
Length = 432
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALPPA-DAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGA 565
S R G NS G + PP ++ + P P P P L +PG GG +GG
Sbjct: 89 SCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPG-GGVPAKKPKGGP 147
Query: 566 SVDVQLAHVELQ 601
+ A + Q
Sbjct: 148 NASSSSATISKQ 159
>U23460-1|AAC99802.1| 664|Homo sapiens proline rich
calmodulin-dependent protein kinase protein.
Length = 664
Score = 29.9 bits (64), Expect = 8.2
Identities = 19/54 (35%), Positives = 25/54 (46%)
Frame = +2
Query: 380 LLVSTSRGGRSNSLDHEGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAE 541
+L S RG + S A P P PAP P S++++ VRR G AE
Sbjct: 415 ILSSVRRGSGARS--RGAPACPSPAPFSPLPAPSPRISDILNSVRRGSGTPEAE 466
>D26579-1|BAA05626.1| 824|Homo sapiens transmembrane protein
protein.
Length = 824
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 404 GRSNSLDHEGDALPPADAGRPHPAPQPAPSELV 502
GRSN L H+ + PA G PAP P ELV
Sbjct: 697 GRSNPLFHQAASRVPAKGGA--PAPSRGPQELV 727
>BC115404-1|AAI15405.1| 824|Homo sapiens ADAM8 protein protein.
Length = 824
Score = 29.9 bits (64), Expect = 8.2
Identities = 16/33 (48%), Positives = 18/33 (54%)
Frame = +2
Query: 404 GRSNSLDHEGDALPPADAGRPHPAPQPAPSELV 502
GRSN L H+ + PA G PAP P ELV
Sbjct: 697 GRSNPLFHQAASRVPAKGGA--PAPSRGPQELV 727
>BC077721-1|AAH77721.1| 1030|Homo sapiens ARHGEF18 protein protein.
Length = 1030
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 STSRGGRSNS--LDHEGDALPPADAGRPHPAPQPAPS 493
STSR RS S L PP D G P P+P PA S
Sbjct: 936 STSRNRRSLSPILPGRHSPAPPPDPGFPAPSPPPADS 972
>BC070272-1|AAH70272.1| 223|Homo sapiens chromosome 17 open reading
frame 59 protein.
Length = 223
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDPGA-GGAERVSQRGGASVD 574
PP+ RP PAP P P+ + + DP ER+S+ G VD
Sbjct: 100 PPSAPARPCPAPAPTPTPAIPPI--DPEVLRDLERLSRELGGRVD 142
>BC018880-1|AAH18880.1| 223|Homo sapiens chromosome 17 open reading
frame 59 protein.
Length = 223
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDPGA-GGAERVSQRGGASVD 574
PP+ RP PAP P P+ + + DP ER+S+ G VD
Sbjct: 100 PPSAPARPCPAPAPTPTPAIPPI--DPEVLRDLERLSRELGGRVD 142
>BC009261-1|AAH09261.1| 223|Homo sapiens chromosome 17 open reading
frame 59 protein.
Length = 223
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDPGA-GGAERVSQRGGASVD 574
PP+ RP PAP P P+ + + DP ER+S+ G VD
Sbjct: 100 PPSAPARPCPAPAPTPTPAIPPI--DPEVLRDLERLSRELGGRVD 142
>BC008789-1|AAH08789.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALPPA-DAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGA 565
S R G NS G + PP ++ + P P P P L +PG GG +GG
Sbjct: 89 SCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPG-GGVPAKKPKGGP 147
Query: 566 SVDVQLAHVELQ 601
+ A + Q
Sbjct: 148 NASSSSATISKQ 159
>BC005124-1|AAH05124.1| 432|Homo sapiens homeobox D3 protein.
Length = 432
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/72 (29%), Positives = 29/72 (40%), Gaps = 1/72 (1%)
Frame = +2
Query: 389 STSRGGRSNSLDHEGDALPPA-DAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGA 565
S R G NS G + PP ++ + P P P P L +PG GG +GG
Sbjct: 89 SCMRPGTGNSQGGGGGSQPPGLNSEQQPPQPPPPPPTLPPSSPTNPG-GGVPAKKPKGGP 147
Query: 566 SVDVQLAHVELQ 601
+ A + Q
Sbjct: 148 NASSSSATISKQ 159
>AL365502-2|CAI14576.1| 145|Homo sapiens nasal embryonic LHRH
factor protein.
Length = 145
Score = 29.9 bits (64), Expect = 8.2
Identities = 13/18 (72%), Positives = 13/18 (72%), Gaps = 1/18 (5%)
Frame = +2
Query: 440 LPPADAG-RPHPAPQPAP 490
LPP DA RPHP P PAP
Sbjct: 117 LPPTDALLRPHPGPAPAP 134
>AL110210-1|CAB53676.1| 990|Homo sapiens hypothetical protein
protein.
Length = 990
Score = 29.9 bits (64), Expect = 8.2
Identities = 21/61 (34%), Positives = 28/61 (45%), Gaps = 4/61 (6%)
Frame = +2
Query: 446 PADAGR----PHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGT 613
P+ AG+ PH P PAPS V P A +RG A+ D+ + E Q GT
Sbjct: 426 PSSAGQSTPSPHLVPPPAPSPGPGPVPPRPPAAEPPPCLRRGAAAADLLSSSPESQHGGT 485
Query: 614 R 616
+
Sbjct: 486 Q 486
>AK222506-1|BAD96226.1| 223|Homo sapiens hypothetical protein
FLJ20014 variant protein.
Length = 223
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDPGA-GGAERVSQRGGASVD 574
PP+ RP PAP P P+ + + DP ER+S+ G VD
Sbjct: 100 PPSAPARPCPAPAPTPTPAIPPI--DPEVLRDLERLSRELGGRVD 142
>AK000021-1|BAA90889.1| 223|Homo sapiens protein ( Homo sapiens
cDNA FLJ20014 fis, clone ADSE00113. ).
Length = 223
Score = 29.9 bits (64), Expect = 8.2
Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)
Frame = +2
Query: 443 PPADAGRPHPAPQPAPSELVHEVRRDPGA-GGAERVSQRGGASVD 574
PP+ RP PAP P P+ + + DP ER+S+ G VD
Sbjct: 100 PPSAPARPCPAPAPTPTPAIPPI--DPEVLRDLERLSRELGGRVD 142
>AB011093-1|BAA25447.1| 1050|Homo sapiens KIAA0521 protein protein.
Length = 1050
Score = 29.9 bits (64), Expect = 8.2
Identities = 18/37 (48%), Positives = 19/37 (51%), Gaps = 2/37 (5%)
Frame = +2
Query: 389 STSRGGRSNS--LDHEGDALPPADAGRPHPAPQPAPS 493
STSR RS S L PP D G P P+P PA S
Sbjct: 971 STSRNRRSLSPILPGRHSPAPPPDPGFPAPSPPPADS 1007
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 69,361,175
Number of Sequences: 237096
Number of extensions: 1330655
Number of successful extensions: 8272
Number of sequences better than 10.0: 57
Number of HSP's better than 10.0 without gapping: 6203
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7946
length of database: 76,859,062
effective HSP length: 87
effective length of database: 56,231,710
effective search space used: 7197658880
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -