Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D05
         (649 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical p...    98   5e-21
U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical pr...    60   2e-09
U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa ...    60   2e-09
M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical pr...    56   2e-08
U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical pr...    54   7e-08
Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical p...    31   0.70 
Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr...    31   0.93 
Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical p...    30   1.2  
U40954-6|ABQ13043.1|  127|Caenorhabditis elegans Hypothetical pr...    30   1.6  
Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical pr...    29   2.8  
AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical...    29   2.8  
Z81515-4|CAB04196.1|  739|Caenorhabditis elegans Hypothetical pr...    27   8.7  
U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical pr...    27   8.7  

>Z81546-11|CAB04455.2|  394|Caenorhabditis elegans Hypothetical
           protein F53A2.7 protein.
          Length = 394

 Score = 97.9 bits (233), Expect = 5e-21
 Identities = 46/79 (58%), Positives = 56/79 (70%)
 Frame = -1

Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
           E+ EAF  Q L+  + L + M KLNVNGGA ALGHPL ASG+RI+ H+VHE        G
Sbjct: 316 EVNEAFAPQALAVQRELGIPMEKLNVNGGAIALGHPLAASGARISTHIVHELHRRNVKYG 375

Query: 469 VGSACIGGGQGIALMIETV 413
           +GSACIGGGQGIA++ E V
Sbjct: 376 IGSACIGGGQGIAILFEKV 394


>U41105-5|AAA82398.1|  390|Caenorhabditis elegans Hypothetical
           protein T02G5.7 protein.
          Length = 390

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 32/77 (41%), Positives = 44/77 (57%)
 Frame = -1

Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
           E+ EAF    L+  K L ++ S +NV GGA A+GHPLG SG RI   L +         G
Sbjct: 314 ELNEAFAVTVLAFIKELNIEPSVVNVKGGAVAIGHPLGMSGLRIVNSLAYS--LAPGQLG 371

Query: 469 VGSACIGGGQGIALMIE 419
           V + C GGG+  A++I+
Sbjct: 372 VAAICNGGGEATAVLIK 388


>U41105-4|AAA82397.2|  407|Caenorhabditis elegans 3-ketoacyl-coa
           thiolase protein 1 protein.
          Length = 407

 Score = 59.7 bits (138), Expect = 2e-09
 Identities = 31/77 (40%), Positives = 45/77 (58%)
 Frame = -1

Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
           E+ EAF    L+  K L +D S +N +GGA ++GHP+G SG+R+  HLVH         G
Sbjct: 331 EVNEAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGARLITHLVH--TLKSGQIG 388

Query: 469 VGSACIGGGQGIALMIE 419
           V + C GGG    ++I+
Sbjct: 389 VAAICNGGGGSSGMVIQ 405


>M77697-2|AAA27897.2|  448|Caenorhabditis elegans Hypothetical
           protein B0303.3 protein.
          Length = 448

 Score = 56.0 bits (129), Expect = 2e-08
 Identities = 23/60 (38%), Positives = 35/60 (58%)
 Frame = -1

Query: 598 KLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXGVGSACIGGGQGIALMIE 419
           ++ M KLN+ GG+ ++GHP GA+G R+  H  H          V +AC  GG G+ ++IE
Sbjct: 385 RVPMDKLNLWGGSLSIGHPFGATGVRLATHSAHRLKEEKGQYAVIAACAAGGHGVGMLIE 444


>U41105-8|AAA82403.1|  460|Caenorhabditis elegans Hypothetical
           protein T02G5.4 protein.
          Length = 460

 Score = 54.4 bits (125), Expect = 7e-08
 Identities = 29/77 (37%), Positives = 43/77 (55%)
 Frame = -1

Query: 649 EIXEAFVAQTLSCAKALKLDMSKLNVNGGATALGHPLGASGSRITAHLVHEXXXXXXXXG 470
           E+ EAF    L+  K L +D S +N +GGA ++GHP+G SG+ +  HLVH         G
Sbjct: 384 EVNEAFSCVPLAFIKKLGVDPSLVNPHGGAVSIGHPIGMSGASLITHLVH--TLESGQIG 441

Query: 469 VGSACIGGGQGIALMIE 419
           V + C G G    ++I+
Sbjct: 442 VAALCDGDGGSSGMVIQ 458


>Z77662-14|CAI79239.1|  245|Caenorhabditis elegans Hypothetical
           protein F47B8.13 protein.
          Length = 245

 Score = 31.1 bits (67), Expect = 0.70
 Identities = 21/45 (46%), Positives = 24/45 (53%), Gaps = 3/45 (6%)
 Frame = +2

Query: 443 PPADAGRPHPAPQPAPS---ELVHEVRRDPGAGGAERVSQRGGAS 568
           PPADA  P PAP+PAP+   E V     D G G A   +  GG S
Sbjct: 42  PPADAA-PAPAPEPAPAPAPEAVPAPAADAG-GYAAAAAPAGGGS 84


>Z48367-5|CAE54886.1|  993|Caenorhabditis elegans Hypothetical
           protein C33B4.3b protein.
          Length = 993

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +2

Query: 440 LPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGTRQ 619
           LPP  +G P P P P P  L+H       A     +S   G S D  L  V+L++   R+
Sbjct: 800 LPPISSGAPPPPPPPPPGGLMH-----VAASAPVLMSNSKGISADA-LKSVQLKKAEPRE 853


>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
           protein C33B4.3a protein.
          Length = 1110

 Score = 30.7 bits (66), Expect = 0.93
 Identities = 20/60 (33%), Positives = 27/60 (45%)
 Frame = +2

Query: 440 LPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGASVDVQLAHVELQRLGTRQ 619
           LPP  +G P P P P P  L+H       A     +S   G S D  L  V+L++   R+
Sbjct: 800 LPPISSGAPPPPPPPPPGGLMH-----VAASAPVLMSNSKGISADA-LKSVQLKKAEPRE 853


>Z77662-15|CAI79240.1|  255|Caenorhabditis elegans Hypothetical
           protein F47B8.14 protein.
          Length = 255

 Score = 30.3 bits (65), Expect = 1.2
 Identities = 23/60 (38%), Positives = 24/60 (40%), Gaps = 4/60 (6%)
 Frame = +2

Query: 401 GGRSNSLDHEGDALPP----ADAGRPHPAPQPAPSELVHEVRRDPGAGGAERVSQRGGAS 568
           GG S      GDA PP    ADA    PAP PAP            AGG    +  GG S
Sbjct: 27  GGYSGGGGGGGDAAPPPPPPADAA---PAPAPAPEPEAAPAAPAADAGGYAAAASAGGGS 83


>U40954-6|ABQ13043.1|  127|Caenorhabditis elegans Hypothetical
           protein ZK813.7 protein.
          Length = 127

 Score = 29.9 bits (64), Expect = 1.6
 Identities = 14/29 (48%), Positives = 15/29 (51%)
 Frame = +2

Query: 410 SNSLDHEGDALPPADAGRPHPAPQPAPSE 496
           S+S  HE   L PA  GRP P P    SE
Sbjct: 50  SHSRSHESSELKPAGFGRPQPGPIRRSSE 78


>Z77662-5|CAB01192.2|  579|Caenorhabditis elegans Hypothetical
           protein F47B8.5 protein.
          Length = 579

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 21/62 (33%), Positives = 25/62 (40%), Gaps = 6/62 (9%)
 Frame = +2

Query: 401 GGRSNSLDHEGDALPPADAG-----RPHPAPQPAPSELVHEVRRDPGAGG-AERVSQRGG 562
           GG     +    + PPADA       P P P PAP+     V     AGG A   +  GG
Sbjct: 397 GGGGGGGEAAPPSSPPADAAPAPPPAPEPVPAPAPAPEAAPVAPSADAGGYAAAAAPAGG 456

Query: 563 AS 568
            S
Sbjct: 457 GS 458



 Score = 27.9 bits (59), Expect = 6.6
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = +2

Query: 428 EGDALPPADAGRPHPAPQPAPS 493
           EG+A P A A  P PAP PAP+
Sbjct: 472 EGEAAPAAPA-EPAPAPAPAPA 492


>AC084158-11|AAK68558.1|  555|Caenorhabditis elegans Hypothetical
           protein Y69A2AR.14 protein.
          Length = 555

 Score = 29.1 bits (62), Expect = 2.8
 Identities = 10/24 (41%), Positives = 13/24 (54%)
 Frame = +2

Query: 443 PPADAGRPHPAPQPAPSELVHEVR 514
           PP    +PHP P P P   +HE +
Sbjct: 297 PPRRTPQPHPKPPPPPPPPIHEAQ 320


>Z81515-4|CAB04196.1|  739|Caenorhabditis elegans Hypothetical
           protein F26H11.4 protein.
          Length = 739

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +2

Query: 428 EGDALPPADAGRPHPAPQPAPSELVHEVRRDPGAGGAER 544
           +G  +PP  A  P P P P  SE    V   P  G A++
Sbjct: 173 KGVTIPPVAASLPCPPPPPPLSERKKNVGPKPCVGPAQK 211


>U00052-1|AAK95880.2|  308|Caenorhabditis elegans Hypothetical
           protein K02F3.5 protein.
          Length = 308

 Score = 27.5 bits (58), Expect = 8.7
 Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
 Frame = +2

Query: 395 SRGGRS-NSLDHEGDALPPADAGRPHPAPQP 484
           SRGGRS    +   D  P AD G P+  P+P
Sbjct: 63  SRGGRSLQRSEFPTDNTPQADYGNPYSYPRP 93


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,087,098
Number of Sequences: 27780
Number of extensions: 198678
Number of successful extensions: 932
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 742
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 898
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1434198608
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)