Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_D04
         (472 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC006684-9|AAF39958.1|  130|Caenorhabditis elegans Hypothetical ...    67   5e-12
Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical pr...    31   0.42 
AF078157-8|AAG24076.1|  409|Caenorhabditis elegans Hypothetical ...    29   1.7  
U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical p...    29   2.2  
AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical ...    29   2.2  
Z81589-9|CAJ85769.1|  926|Caenorhabditis elegans Hypothetical pr...    28   2.9  
Z81589-8|CAB04720.1|  923|Caenorhabditis elegans Hypothetical pr...    28   2.9  
AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode ast...    28   3.9  
Z99270-2|CAB16469.3|  477|Caenorhabditis elegans Hypothetical pr...    27   5.1  
AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical ...    27   5.1  
Z93388-3|CAB07655.1|  230|Caenorhabditis elegans Hypothetical pr...    27   9.0  
U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical pr...    27   9.0  

>AC006684-9|AAF39958.1|  130|Caenorhabditis elegans Hypothetical
           protein T02H6.11 protein.
          Length = 130

 Score = 67.3 bits (157), Expect = 5e-12
 Identities = 39/99 (39%), Positives = 60/99 (60%), Gaps = 5/99 (5%)
 Frame = -3

Query: 323 SDSLSKWAY-NLSGFNKYGLLRDDCLHE-TPDVTEALRRL---PSHVVDERNFRIVRAIQ 159
           + +L K+A+ NL G  +YGL   D   E  P+VTEALRRL     HV D+R  R+ RA  
Sbjct: 19  ASTLRKFAWSNLWGGREYGLQFHDTYFEPAPEVTEALRRLNLQEPHVFDQRKIRLSRAHT 78

Query: 158 LSMQKTILPKEEWTKYEEDSRDXTPIVEQVEKERLEREQ 42
           L++    LPK EWT+++++S    P ++++E E+  R +
Sbjct: 79  LALHGEKLPKAEWTQWDQESWYLKPYLDEIEAEKKARAE 117


>Z54270-4|CAA91030.2| 1804|Caenorhabditis elegans Hypothetical protein
            F11C1.5a protein.
          Length = 1804

 Score = 31.1 bits (67), Expect = 0.42
 Identities = 23/103 (22%), Positives = 47/103 (45%), Gaps = 14/103 (13%)
 Frame = -3

Query: 311  SKWAYNLSGFNKYGL------LRDDCLHETPDVTE-ALRRLPSHVVDERN-------FRI 174
            ++W     G+N  GL       R D  H+   + + A +++P H++ +          + 
Sbjct: 1466 NQWMGGTGGYNTAGLGGIGGPFRLDAGHDVHQMPDFAKQQVPKHILKKAREIAKVEYAKK 1525

Query: 173  VRAIQLSMQKTILPKEEWTKYEEDSRDXTPIVEQVEKERLERE 45
            +R I +S       ++ W K +  SR    +++Q+E ++ ERE
Sbjct: 1526 LREINMSEYDADAYEKVWNKVQAPSRKLASVIDQLEAKKKERE 1568


>AF078157-8|AAG24076.1|  409|Caenorhabditis elegans Hypothetical
           protein F25E5.5 protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 1.7
 Identities = 16/67 (23%), Positives = 26/67 (38%)
 Frame = -3

Query: 293 LSGFNKYGLLRDDCLHETPDVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTK 114
           + GF K+ +L DDC  E     +   R    +  + ++ IV    L +    +   E   
Sbjct: 46  IGGFEKWPVLTDDCKIEVVKYLDLWSRCKLSICSKSDYEIVNKTALKLDCIDIQDNETWH 105

Query: 113 YEEDSRD 93
           YE    D
Sbjct: 106 YELSKED 112


>U64857-15|AAC25858.1|  470|Caenorhabditis elegans Hypothetical
           protein C37C3.1 protein.
          Length = 470

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 13/32 (40%), Positives = 20/32 (62%), Gaps = 2/32 (6%)
 Frame = -1

Query: 100 PETXPQLLSKLRKRGWRESKWE--KED*MRHG 11
           P+T   + SK   +GW++S W+  KE+ MR G
Sbjct: 84  PKTMKTMCSKWSLKGWKDSVWDENKEEVMRIG 115


>AL021447-4|CAB60285.3|  330|Caenorhabditis elegans Hypothetical
           protein F19B2.8 protein.
          Length = 330

 Score = 28.7 bits (61), Expect = 2.2
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -1

Query: 211 FHPMLLTRETSVLYVPYSSPCKKQSYLKKSGQN 113
           FH +LL   TS+LY+P     +K SYL  S +N
Sbjct: 199 FHSILLIA-TSLLYIPIMRHVRKFSYLPSSQKN 230


>Z81589-9|CAJ85769.1|  926|Caenorhabditis elegans Hypothetical
           protein T08G5.5b protein.
          Length = 926

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -3

Query: 236 DVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEE 123
           D ++ LR+  SH++ ER+F +  AIQL+    +  +E+
Sbjct: 319 DTSQNLRKNVSHLIQERHFEL--AIQLAENSNLFAEEQ 354


>Z81589-8|CAB04720.1|  923|Caenorhabditis elegans Hypothetical
           protein T08G5.5a protein.
          Length = 923

 Score = 28.3 bits (60), Expect = 2.9
 Identities = 13/38 (34%), Positives = 24/38 (63%)
 Frame = -3

Query: 236 DVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEE 123
           D ++ LR+  SH++ ER+F +  AIQL+    +  +E+
Sbjct: 319 DTSQNLRKNVSHLIQERHFEL--AIQLAENSNLFAEEQ 354


>AF022979-10|AAB69905.3|  651|Caenorhabditis elegans Nematode
           astacin protease protein32 protein.
          Length = 651

 Score = 27.9 bits (59), Expect = 3.9
 Identities = 13/31 (41%), Positives = 19/31 (61%)
 Frame = -1

Query: 154 PCKKQSYLKKSGQNMKKIPETXPQLLSKLRK 62
           P K++  LKK G+ M KIP+   +  +KL K
Sbjct: 116 PEKRKKQLKKMGKKMMKIPKITKKESNKLHK 146


>Z99270-2|CAB16469.3|  477|Caenorhabditis elegans Hypothetical
           protein Y37A1A.2 protein.
          Length = 477

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 12/26 (46%), Positives = 16/26 (61%)
 Frame = +1

Query: 127 SLGRIVFCMESCMARTIRKFLSSTTW 204
           SL RI  C+ SC+   I  +L+ TTW
Sbjct: 403 SLTRIYQCVASCVILFISPYLTVTTW 428


>AF067621-1|AAC17540.2| 4368|Caenorhabditis elegans Hypothetical
            protein F55F10.1 protein.
          Length = 4368

 Score = 27.5 bits (58), Expect = 5.1
 Identities = 17/48 (35%), Positives = 25/48 (52%), Gaps = 8/48 (16%)
 Frame = -3

Query: 134  PKEEWTKYEEDSRDXTPIVEQVEKER--------LEREQVGEGRLNET 15
            PKE+  K EED        E+VE++R        +E  ++G+G  NET
Sbjct: 3930 PKEKAEKEEEDEEKEKDDEEKVERKRELATDDAPMEEAEMGDGEENET 3977


>Z93388-3|CAB07655.1|  230|Caenorhabditis elegans Hypothetical
           protein T10C6.5 protein.
          Length = 230

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 22/74 (29%), Positives = 35/74 (47%)
 Frame = -3

Query: 236 DVTEALRRLPSHVVDERNFRIVRAIQLSMQKTILPKEEWTKYEEDSRDXTPIVEQVEKER 57
           D  EA+  L S   D+ +     A+   ++K  + KE   + EE +     I E+ EK+R
Sbjct: 104 DADEAVDELNSSDDDDSDEDDTAALMAELEK--IKKE---RAEEKAARDEEIKEKEEKQR 158

Query: 56  LEREQVGEGRLNET 15
           +E    G   LN+T
Sbjct: 159 MENILAGNPLLNDT 172


>U42436-1|AAF99891.1|  305|Caenorhabditis elegans Hypothetical
           protein C49H3.8 protein.
          Length = 305

 Score = 26.6 bits (56), Expect = 9.0
 Identities = 11/25 (44%), Positives = 14/25 (56%)
 Frame = -3

Query: 128 EEWTKYEEDSRDXTPIVEQVEKERL 54
           E WTK+E       P +E + KERL
Sbjct: 130 ENWTKWEASEEGEKPDIETLCKERL 154


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 10,164,698
Number of Sequences: 27780
Number of extensions: 199341
Number of successful extensions: 848
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 795
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 847
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 850313440
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)