Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D03
(429 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical... 85 2e-17
Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical pr... 36 0.009
X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase... 36 0.009
D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosi... 36 0.009
Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical pr... 32 0.20
Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical pr... 31 0.27
Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical p... 31 0.27
Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical pr... 31 0.35
U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical pr... 30 0.61
AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical... 30 0.81
U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated p... 29 1.1
U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated p... 29 1.1
U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated p... 29 1.1
U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated p... 29 1.1
AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical ... 29 1.1
AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucle... 29 1.1
U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy ch... 29 1.9
L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy ch... 29 1.9
AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily a... 29 1.9
U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical pr... 27 4.3
U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical pr... 27 4.3
AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical ... 27 4.3
AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical ... 27 4.3
AC006627-10|AAK85465.1| 499|Caenorhabditis elegans Hypothetical... 27 4.3
Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical pr... 27 5.7
Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical pr... 27 5.7
AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical ... 27 5.7
Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical pr... 27 7.5
Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical pr... 27 7.5
U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog (hedg... 27 7.5
AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical... 27 7.5
Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical pr... 26 10.0
U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical pr... 26 10.0
>AC024859-18|AAK29974.1| 121|Caenorhabditis elegans Hypothetical
protein Y71H2AM.5 protein.
Length = 121
Score = 85.0 bits (201), Expect = 2e-17
Identities = 30/66 (45%), Positives = 43/66 (65%)
Frame = -3
Query: 283 LKTAPFDPRFPNQNQTRHCYQSYVDFHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWD 104
L AP+D RFP + R C+ YVDFHRC ++ G+ Y+PC +F+ VY+ CP W ++WD
Sbjct: 48 LWAAPYDARFPQVRKQRQCFAYYVDFHRCNELMGQDYKPCKFFQNVYKDFCPGFWTERWD 107
Query: 103 NQRAEG 86
+EG
Sbjct: 108 ELLSEG 113
>Z70038-6|CAA93882.3| 1323|Caenorhabditis elegans Hypothetical
protein ZK1067.1 protein.
Length = 1323
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -3
Query: 340 RNG*IIISNMPEM--IKSPADLKTAPFDP---RFPNQNQTRHCYQSYVDFHRCQKVRGEK 176
RNG + I + P+M I D K +DP + N +HCYQ+ +C + +K
Sbjct: 168 RNGSVTIQDNPKMCYIGDKIDWKELLYDPDVQKVETTNSHQHCYQNGKSMAKCHESCNDK 227
Query: 175 Y--EPCYYFKRVYRSLCP 128
+RVYRS+CP
Sbjct: 228 CWGSGDNDCQRVYRSVCP 245
>X57767-1|CAA40919.1| 1323|Caenorhabditis elegans tyrosine kinase
protein.
Length = 1323
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -3
Query: 340 RNG*IIISNMPEM--IKSPADLKTAPFDP---RFPNQNQTRHCYQSYVDFHRCQKVRGEK 176
RNG + I + P+M I D K +DP + N +HCYQ+ +C + +K
Sbjct: 168 RNGSVTIQDNPKMCYIGDKIDWKELLYDPDVQKVETTNSHQHCYQNGKSMAKCHESCNDK 227
Query: 175 Y--EPCYYFKRVYRSLCP 128
+RVYRS+CP
Sbjct: 228 CWGSGDNDCQRVYRSVCP 245
>D63426-1|BAA09729.1| 1374|Caenorhabditis elegans receptor tyrosine
kinase protein.
Length = 1374
Score = 36.3 bits (80), Expect = 0.009
Identities = 25/78 (32%), Positives = 37/78 (47%), Gaps = 7/78 (8%)
Frame = -3
Query: 340 RNG*IIISNMPEM--IKSPADLKTAPFDP---RFPNQNQTRHCYQSYVDFHRCQKVRGEK 176
RNG + I + P+M I D K +DP + N +HCYQ+ +C + +K
Sbjct: 219 RNGSVTIQDNPKMCYIGDKIDWKELLYDPDVQKVETTNSHQHCYQNGKSMAKCHESCNDK 278
Query: 175 Y--EPCYYFKRVYRSLCP 128
+RVYRS+CP
Sbjct: 279 CWGSGDNDCQRVYRSVCP 296
>Z66495-4|CAA91271.1| 954|Caenorhabditis elegans Hypothetical
protein C36A4.5 protein.
Length = 954
Score = 31.9 bits (69), Expect = 0.20
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 237 RGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPXPXGXRAE 58
RG K +A+K A A S+ + +SAP + + + T+SAP A P R +
Sbjct: 404 RGAPAKAAKAEAIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-ATAPEASRRD 462
>Z48582-8|CAB70201.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -1
Query: 288 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTS 109
PTS ++T S + T+T + TST A+ +TS + +++ + ST+
Sbjct: 297 PTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTT 356
Query: 108 GTTSAPKAPXP 76
+TS P P
Sbjct: 357 LSTSIPTTTTP 367
>Z48544-10|CAB70192.1| 3178|Caenorhabditis elegans Hypothetical
protein ZK945.9 protein.
Length = 3178
Score = 31.5 bits (68), Expect = 0.27
Identities = 19/71 (26%), Positives = 33/71 (46%)
Frame = -1
Query: 288 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTS 109
PTS ++T S + T+T + TST A+ +TS + +++ + ST+
Sbjct: 297 PTSTSTVTTAMSTSTSTPSTSTTIESTSTTFTSTASTSTSSTSTTQQSSSTITSSPSSTT 356
Query: 108 GTTSAPKAPXP 76
+TS P P
Sbjct: 357 LSTSIPTTTTP 367
>Z78418-3|CAB01697.1| 932|Caenorhabditis elegans Hypothetical
protein F25D7.4 protein.
Length = 932
Score = 31.1 bits (67), Expect = 0.35
Identities = 18/60 (30%), Positives = 28/60 (46%)
Frame = -1
Query: 237 RGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPXPXGXRAE 58
RG K +A+K A A S+ + +SAP + + + T+SAP A P R +
Sbjct: 382 RGAPAKAPKAEPIAQKKVAGKVQRAAPSKPASAVSAPKATAPASTSSAP-ATAPEASRRD 440
>U80846-3|AAC70890.1| 2232|Caenorhabditis elegans Hypothetical protein
K06A9.1b protein.
Length = 2232
Score = 30.3 bits (65), Expect = 0.61
Identities = 18/62 (29%), Positives = 31/62 (50%)
Frame = -1
Query: 285 TSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSG 106
+SK S S T T T +ST+ + +T H T+S+ +G ++P + S +G
Sbjct: 1406 SSKASSSPVPSQTSSTPTNPTGSTESSTLLSSTISGSTQHTTMSKASSGSTSPSTNSQTG 1465
Query: 105 TT 100
+T
Sbjct: 1466 ST 1467
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = -1
Query: 219 VTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPXPXGXRAETXPMLE 40
+T + A S +++ E T S SGS+ GT S +P P T M
Sbjct: 639 ITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMST 698
Query: 39 LIS 31
L S
Sbjct: 699 LTS 701
>AF000263-15|AAG00018.1| 416|Caenorhabditis elegans Hypothetical
protein T08B2.11 protein.
Length = 416
Score = 29.9 bits (64), Expect = 0.81
Identities = 17/53 (32%), Positives = 27/53 (50%)
Frame = -1
Query: 243 IRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKA 85
++ G AT+ S ++ T+H ++ + LSA + G TSG APKA
Sbjct: 77 VKEGKATRRKEKSIEKKEHEQPKTTHR---KKKSSLSASLEGKTSGENEAPKA 126
>U80436-5|AAT68892.1| 2140|Caenorhabditis elegans Uncoordinated
protein 73, isoform f protein.
Length = 2140
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 297 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSG 118
+RP S ST +RR A + A ++ N S AT R+ T S+P++
Sbjct: 1642 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 1699
Query: 117 STSGTTSAPKAP 82
+ T S+ AP
Sbjct: 1700 NGHTTESSTSAP 1711
>U80436-3|AAL06029.3| 633|Caenorhabditis elegans Uncoordinated
protein 73, isoform e protein.
Length = 633
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 297 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSG 118
+RP S ST +RR A + A ++ N S AT R+ T S+P++
Sbjct: 77 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 134
Query: 117 STSGTTSAPKAP 82
+ T S+ AP
Sbjct: 135 NGHTTESSTSAP 146
>U80436-2|AAC71110.1| 928|Caenorhabditis elegans Uncoordinated
protein 73, isoform c protein.
Length = 928
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 297 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSG 118
+RP S ST +RR A + A ++ N S AT R+ T S+P++
Sbjct: 82 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 139
Query: 117 STSGTTSAPKAP 82
+ T S+ AP
Sbjct: 140 NGHTTESSTSAP 151
>U80436-1|AAC71108.1| 2488|Caenorhabditis elegans Uncoordinated
protein 73, isoform a protein.
Length = 2488
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 297 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSG 118
+RP S ST +RR A + A ++ N S AT R+ T S+P++
Sbjct: 1642 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 1699
Query: 117 STSGTTSAPKAP 82
+ T S+ AP
Sbjct: 1700 NGHTTESSTSAP 1711
>AF077534-3|AAC26290.1| 389|Caenorhabditis elegans Hypothetical
protein K07D4.6 protein.
Length = 389
Score = 29.5 bits (63), Expect = 1.1
Identities = 18/64 (28%), Positives = 28/64 (43%)
Frame = -1
Query: 288 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTS 109
P + + ST T T T TST + TS +TIS T + P + +T+
Sbjct: 256 PGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTSTSTISTTSTTTTTPTTTTTT 315
Query: 108 GTTS 97
+T+
Sbjct: 316 TSTT 319
Score = 27.9 bits (59), Expect = 3.3
Identities = 19/67 (28%), Positives = 26/67 (38%)
Frame = -1
Query: 297 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSG 118
+R P + +TH SLT + T T T + T + T + P S
Sbjct: 237 DRIPLFRTTTTTHSSLTAVPGTTEETSTEPETTTTSTTTTEPTTTTSTTTQTTTTVPTST 296
Query: 117 STSGTTS 97
ST TTS
Sbjct: 297 STISTTS 303
>AF048834-1|AAC12931.1| 2488|Caenorhabditis elegans guanine nucleotide
exchange factorUNC-73A protein.
Length = 2488
Score = 29.5 bits (63), Expect = 1.1
Identities = 21/72 (29%), Positives = 32/72 (44%)
Frame = -1
Query: 297 NRPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSG 118
+RP S ST +RR A + A ++ N S AT R+ T S+P++
Sbjct: 1642 DRPDDSNASGSTVSKRKSLRRIFANSSKERAAAANSSSSNNNSPAT--RQSTSTSSPVTA 1699
Query: 117 STSGTTSAPKAP 82
+ T S+ AP
Sbjct: 1700 NGHTTESSTSAP 1711
>U80440-1|AAK21472.1| 4568|Caenorhabditis elegans Dynein heavy chain
protein 1 protein.
Length = 4568
Score = 28.7 bits (61), Expect = 1.9
Identities = 23/91 (25%), Positives = 40/91 (43%)
Frame = +2
Query: 23 KQIEINSSIGXVSALNPXGXGAFGALVVPLVDPLIGAERPVHSLEIVAWLVFFAANFLAT 202
K++ +NS+IG +NP G L L +++A ++ F+ F T
Sbjct: 1954 KRLNVNSNIGIFITMNP-GYSGRSNLPDNLKQLFRSLAMTQPDRQLIAQVMLFSQGF-RT 2011
Query: 203 VEVHVTLVAVPRLILVREPWVERCCFEVGGR 295
E + VP IL +E ++C ++ G R
Sbjct: 2012 AETLANKI-VPLFILCKEQLSDQCHYDFGLR 2041
>L33260-1|AAC37251.1| 4568|Caenorhabditis elegans dynein heavy chain
protein.
Length = 4568
Score = 28.7 bits (61), Expect = 1.9
Identities = 23/91 (25%), Positives = 40/91 (43%)
Frame = +2
Query: 23 KQIEINSSIGXVSALNPXGXGAFGALVVPLVDPLIGAERPVHSLEIVAWLVFFAANFLAT 202
K++ +NS+IG +NP G L L +++A ++ F+ F T
Sbjct: 1954 KRLNVNSNIGIFITMNP-GYSGRSNLPDNLKQLFRSLAMTQPDRQLIAQVMLFSQGF-RT 2011
Query: 203 VEVHVTLVAVPRLILVREPWVERCCFEVGGR 295
E + VP IL +E ++C ++ G R
Sbjct: 2012 AETLANKI-VPLFILCKEQLSDQCHYDFGLR 2041
>AF039037-5|AAC48228.3| 714|Caenorhabditis elegans Temporarily
assigned gene nameprotein 40 protein.
Length = 714
Score = 28.7 bits (61), Expect = 1.9
Identities = 21/63 (33%), Positives = 29/63 (46%), Gaps = 2/63 (3%)
Frame = -3
Query: 292 PADLKTAPFDPRFPNQNQTRH-CYQSYVDFHRCQ-KVRGEKYEPCYYFKRVYRSLCPNEW 119
P D P DPR+ N+N+ R+ + Y RCQ + G YF R + N W
Sbjct: 483 PTDYPLGPKDPRY-NENERRYDVWNYYNPLIRCQIYIMGLVLG---YFMRKVPKININPW 538
Query: 118 VDK 110
VD+
Sbjct: 539 VDR 541
>U80846-5|AAP82647.1| 825|Caenorhabditis elegans Hypothetical
protein K06A9.1c protein.
Length = 825
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = -1
Query: 219 VTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPXPXGXRAETXPMLE 40
+T + A S +++ E T S SGS+ GT S +P P T M
Sbjct: 432 ITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMST 491
Query: 39 LIS 31
L S
Sbjct: 492 LTS 494
>U80846-4|AAC70889.1| 1032|Caenorhabditis elegans Hypothetical
protein K06A9.1a protein.
Length = 1032
Score = 27.5 bits (58), Expect = 4.3
Identities = 18/63 (28%), Positives = 25/63 (39%)
Frame = -1
Query: 219 VTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPKAPXPXGXRAETXPMLE 40
+T + A S +++ E T S SGS+ GT S +P P T M
Sbjct: 639 ITPEGSTASSPTGSTGSTFSVATEVTSQSTVPSGSSLGTQSTNSSPSPSSLSPSTSGMST 698
Query: 39 LIS 31
L S
Sbjct: 699 LTS 701
>AL117195-5|CAB55012.1| 732|Caenorhabditis elegans Hypothetical
protein Y57A10A.7 protein.
Length = 732
Score = 27.5 bits (58), Expect = 4.3
Identities = 12/36 (33%), Positives = 19/36 (52%)
Frame = -3
Query: 208 FHRCQKVRGEKYEPCYYFKRVYRSLCPNEWVDKWDN 101
F+R ++ G YY+ R + + PN + KWDN
Sbjct: 29 FNRFAELDGAGLSHIYYYIRFHEHIAPN--IAKWDN 62
>AF125461-4|AAK18995.1| 1360|Caenorhabditis elegans Hypothetical
protein Y8A9A.2 protein.
Length = 1360
Score = 27.5 bits (58), Expect = 4.3
Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 3/71 (4%)
Frame = -1
Query: 285 TSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGST-- 112
T ST + T+ + T+ T TST + + +TS + + E T S S ST
Sbjct: 219 TESTSTSTDSTTTESTTESTTESTSTSTDSTTTESTSTSTDSTTTESTTESTTESTSTST 278
Query: 111 -SGTTSAPKAP 82
S TTS P P
Sbjct: 279 DSTTTSLPALP 289
>AC006627-10|AAK85465.1| 499|Caenorhabditis elegans Hypothetical
protein E01A2.8 protein.
Length = 499
Score = 27.5 bits (58), Expect = 4.3
Identities = 10/37 (27%), Positives = 21/37 (56%)
Frame = -3
Query: 133 CPNEWVDKWDNQRAEGTXAGRIXSRNXPDA*IDFDLF 23
C + D N +++G AG+ ++N P+ ++F+ F
Sbjct: 51 CSSSLNDNQQNTKSDGITAGKSTTQNTPNETVNFNFF 87
>Z99171-4|CAB16313.1| 722|Caenorhabditis elegans Hypothetical
protein F47G4.4 protein.
Length = 722
Score = 27.1 bits (57), Expect = 5.7
Identities = 20/75 (26%), Positives = 29/75 (38%)
Frame = -1
Query: 294 RPPTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGS 115
R P+ ST S T R + V ++ +A ++ S +G +A S
Sbjct: 480 RTPSEGDVASTVSSSTSRNRRPSPSVAKKTSPPSIYAITSSPAKRASSTASGPTARRQNS 539
Query: 114 TSGTTSAPKAPXPXG 70
TS TS A P G
Sbjct: 540 TSSVTSTTSAKTPVG 554
>Z74473-5|CAI79195.1| 245|Caenorhabditis elegans Hypothetical
protein F56H9.6 protein.
Length = 245
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/69 (26%), Positives = 28/69 (40%)
Frame = -1
Query: 288 PTSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTS 109
PT+ ST + T T T T TST + T+ + + T + + +T+
Sbjct: 65 PTTTSTTSTTTTTTPTTTTTTTPTTTTSTTSTTTTTTPTTTTSTTTTTTTTTTTATPTTT 124
Query: 108 GTTSAPKAP 82
TT P P
Sbjct: 125 TTTMPPCNP 133
>Z49207-3|CAA89071.1| 927|Caenorhabditis elegans Hypothetical
protein R07E3.6 protein.
Length = 927
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/51 (35%), Positives = 23/51 (45%), Gaps = 3/51 (5%)
Frame = -1
Query: 225 TKVTWTSTVARKFAAKNTSHATISRE---CTGLSAPMSGSTSGTTSAPKAP 82
TKVT TST T AT + E T AP + +T TT+ + P
Sbjct: 310 TKVTPTSTTTEIPTTTTTEEATTTTEEITTTTTKAPTTTTTQSTTTTTQLP 360
>AF077538-1|AAC64622.1| 1275|Caenorhabditis elegans Hypothetical
protein H02F09.3 protein.
Length = 1275
Score = 27.1 bits (57), Expect = 5.7
Identities = 18/64 (28%), Positives = 33/64 (51%), Gaps = 1/64 (1%)
Frame = -1
Query: 282 SKQHLSTHGS-LTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSG 106
S ST GS ++ + + T++ T STV+ + +S +TIS + TG + + G
Sbjct: 846 SSVETSTSGSSVSTVSQSTSSSTTGQSTVSESSVSTVSSESTIS-QSTGSTTTGESTVFG 904
Query: 105 TTSA 94
+T +
Sbjct: 905 STGS 908
>Z80215-6|CAD56562.2| 1052|Caenorhabditis elegans Hypothetical
protein C36B1.8b protein.
Length = 1052
Score = 26.6 bits (56), Expect = 7.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -1
Query: 279 KQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGS--TSG 106
+Q ST GS TAT T ++ N+SH+ + + +A S S TS
Sbjct: 52 QQKKSTDGSTMNGNNATATAAATTQNSSQIGQNSNSSHSVTNDNTSSNNASTSTSSITST 111
Query: 105 TTSAPKAP 82
TT+ P
Sbjct: 112 TTTTTTVP 119
>Z80215-5|CAB02273.3| 1049|Caenorhabditis elegans Hypothetical
protein C36B1.8a protein.
Length = 1049
Score = 26.6 bits (56), Expect = 7.5
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)
Frame = -1
Query: 279 KQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGS--TSG 106
+Q ST GS TAT T ++ N+SH+ + + +A S S TS
Sbjct: 52 QQKKSTDGSTMNGNNATATAAATTQNSSQIGQNSNSSHSVTNDNTSSNNASTSTSSITST 111
Query: 105 TTSAPKAP 82
TT+ P
Sbjct: 112 TTTTTTVP 119
>U41746-9|AAA83334.3| 559|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 6 protein.
Length = 559
Score = 26.6 bits (56), Expect = 7.5
Identities = 23/77 (29%), Positives = 33/77 (42%)
Frame = -1
Query: 285 TSKQHLSTHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSG 106
T+++++ RR T ++T T+T AA T T +R T L+
Sbjct: 258 TTQRYIEPTTQRPTTRRATTKRITTTTT-----AAPTTPRLTTARATTPLA--------- 303
Query: 105 TTSAPKAPXPXGXRAET 55
TTS P P P RA T
Sbjct: 304 TTSRPTTPSPTTPRATT 320
>AL032637-15|CAA21616.2| 370|Caenorhabditis elegans Hypothetical
protein Y43F8C.16 protein.
Length = 370
Score = 26.6 bits (56), Expect = 7.5
Identities = 19/75 (25%), Positives = 29/75 (38%)
Frame = -1
Query: 267 STHGSLTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPK 88
S+ LT T T + ++ + TS T + S ST+ +T+ PK
Sbjct: 252 SSTSLLTSTLASTTTLIPTSTMSTITLTSDRTSTITSTGSSNPPSTSTVPSTTTSTTTPK 311
Query: 87 APXPXGXRAETXPML 43
P A T P+L
Sbjct: 312 PSSPSTAEASTTPVL 326
>Z73896-4|CAA98057.2| 503|Caenorhabditis elegans Hypothetical
protein F09E8.6 protein.
Length = 503
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/48 (31%), Positives = 24/48 (50%)
Frame = -1
Query: 231 TATKVTWTSTVARKFAAKNTSHATISRECTGLSAPMSGSTSGTTSAPK 88
T T T V R +N S ++ +R + ++ +T+ TTSAPK
Sbjct: 419 TTTTTTTPKPVPRNKEKENKSASSTTRGTSTATSTTPKTTTTTTSAPK 466
>U28738-2|AAA68309.4| 982|Caenorhabditis elegans Hypothetical protein
T28D9.7 protein.
Length = 982
Score = 26.2 bits (55), Expect = 10.0
Identities = 15/32 (46%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Frame = -1
Query: 120 GSTSGTTSAPKAPXPXGXRAET-XPMLELISI 28
GSTSG S+P+AP R E+ P E IS+
Sbjct: 913 GSTSGYYSSPRAPPQANPRDESPIPDTEPISV 944
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,340,579
Number of Sequences: 27780
Number of extensions: 182908
Number of successful extensions: 650
Number of sequences better than 10.0: 34
Number of HSP's better than 10.0 without gapping: 608
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 644
length of database: 12,740,198
effective HSP length: 75
effective length of database: 10,656,698
effective search space used: 713998766
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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