Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_D03
(429 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated... 23 1.1
EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase p... 23 1.4
DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channe... 23 1.4
DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride c... 23 1.4
DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride c... 23 1.4
AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl sub... 23 1.4
AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein. 23 1.9
DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated... 22 3.3
DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channe... 21 4.4
DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein pr... 21 4.4
AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin prot... 21 5.8
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 21 7.7
>DQ667193-1|ABG75745.1| 510|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 510
Score = 23.4 bits (48), Expect = 1.1
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 329 LAVSWIYFNRKWQPHNRFTNENRQYVH 409
L++S R W+P F N YVH
Sbjct: 107 LSLSIKMLERIWRPDTYFYNGKHSYVH 133
>EF540769-1|ABQ14707.1| 620|Apis mellifera adenosine deaminase
protein.
Length = 620
Score = 23.0 bits (47), Expect = 1.4
Identities = 12/30 (40%), Positives = 16/30 (53%)
Frame = -3
Query: 151 RVYRSLCPNEWVDKWDNQRAEGTXAGRIXS 62
R++ NE VDK N+RA G +I S
Sbjct: 376 RIFSPHEENESVDKHPNRRARGQLRTKIES 405
>DQ667183-1|ABG75735.1| 463|Apis mellifera GABA-gated ion channel
protein.
Length = 463
Score = 23.0 bits (47), Expect = 1.4
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = +2
Query: 329 LAVSWIYFNRKWQPHNRFTNENRQYVH 409
LA+S R W+P F N Y+H
Sbjct: 75 LALSISMLARIWKPDTYFYNGKHSYLH 101
>DQ667182-1|ABG75734.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.4
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 329 LAVSWIYFNRKWQPHNRFTNENRQYVH 409
L+V + W P F NE + Y H
Sbjct: 83 LSVGSEFIKNIWVPDTFFVNEKQSYFH 109
>DQ667181-1|ABG75733.1| 445|Apis mellifera GABA-gated chloride
channel protein.
Length = 445
Score = 23.0 bits (47), Expect = 1.4
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 329 LAVSWIYFNRKWQPHNRFTNENRQYVH 409
L+V + W P F NE + Y H
Sbjct: 83 LSVGSEFIKNIWVPDTFFVNEKQSYFH 109
>AF094822-1|AAC63381.1| 365|Apis mellifera GABA receptor Rdl
subunit protein.
Length = 365
Score = 23.0 bits (47), Expect = 1.4
Identities = 9/27 (33%), Positives = 12/27 (44%)
Frame = +2
Query: 329 LAVSWIYFNRKWQPHNRFTNENRQYVH 409
L+V + W P F NE + Y H
Sbjct: 22 LSVGSEFIKNIWVPDTFFVNEKQSYFH 48
>AF487333-1|AAL93262.1| 80|Apis mellifera integrin betaPS protein.
Length = 80
Score = 22.6 bits (46), Expect = 1.9
Identities = 8/19 (42%), Positives = 12/19 (63%)
Frame = -3
Query: 322 ISNMPEMIKSPADLKTAPF 266
+S MP+ +K P D AP+
Sbjct: 9 VSTMPKSLKEPCDGCAAPY 27
>DQ667195-1|ABG75747.1| 469|Apis mellifera cys-loop ligand-gated
ion channel subunit protein.
Length = 469
Score = 21.8 bits (44), Expect = 3.3
Identities = 14/39 (35%), Positives = 18/39 (46%)
Frame = -1
Query: 252 LTKIRRGTATKVTWTSTVARKFAAKNTSHATISRECTGL 136
L K+ K T T +ARK KNT+ SR + L
Sbjct: 327 LKKVNSKYILKSTLTPKLARKQFQKNTTGLERSRSWSSL 365
>DQ667184-1|ABG75736.1| 489|Apis mellifera GABA-gated ion channel
protein.
Length = 489
Score = 21.4 bits (43), Expect = 4.4
Identities = 8/31 (25%), Positives = 14/31 (45%)
Frame = +2
Query: 329 LAVSWIYFNRKWQPHNRFTNENRQYVHRPAE 421
L +S + + W P F N+ ++H E
Sbjct: 106 LTLSGDFAEKIWVPDTFFANDKNSFLHDVTE 136
>DQ011227-1|AAY63896.1| 484|Apis mellifera Amt-1-like protein
protein.
Length = 484
Score = 21.4 bits (43), Expect = 4.4
Identities = 7/13 (53%), Positives = 9/13 (69%)
Frame = -1
Query: 402 YCLFSFVKRLCGC 364
YCLFSF+ + C
Sbjct: 148 YCLFSFLNTIVYC 160
>AB073997-1|BAC76401.1| 124|Apis mellifera preprotachykinin
protein.
Length = 124
Score = 21.0 bits (42), Expect = 5.8
Identities = 13/34 (38%), Positives = 16/34 (47%)
Frame = +1
Query: 106 PTCRPTHWGRETCTLS*NSSMARIFRRELSGNGG 207
PT G+E + S NS IF+R L G G
Sbjct: 31 PTGHQEMQGKEKNSASLNSENFGIFKRALMGFQG 64
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 20.6 bits (41), Expect = 7.7
Identities = 7/26 (26%), Positives = 12/26 (46%)
Frame = +2
Query: 158 IVAWLVFFAANFLATVEVHVTLVAVP 235
++ WL FF N + + +T P
Sbjct: 629 LICWLPFFTCNIMDAICTKLTADCQP 654
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,699
Number of Sequences: 438
Number of extensions: 2433
Number of successful extensions: 14
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 52
effective length of database: 123,567
effective search space used: 11121030
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 40 (21.2 bits)
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