Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C24
         (826 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein ...   343   5e-96
AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.         27   0.53 
AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox prote...    25   3.7  
AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical prote...    25   3.7  
AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical prote...    25   3.7  
DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor...    24   6.5  
AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding pr...    23   8.6  

>AF164152-1|AAD47076.1|  261|Anopheles gambiae ribosomal protein L8
           protein.
          Length = 261

 Score =  343 bits (842), Expect = 5e-96
 Identities = 156/188 (82%), Positives = 173/188 (92%)
 Frame = -3

Query: 779 MGRVIRAQRKGAGSVFVSHTKKRKGAPKLRSLDYAERHGYIKGVVKDIIHDPGRGAPLAV 600
           MGRVIRAQRKGAGSVF +HTKKRKG PKLR LDYAERHGY+KGVVK II DPGRGAPLAV
Sbjct: 1   MGRVIRAQRKGAGSVFRAHTKKRKGQPKLRHLDYAERHGYLKGVVKQIIQDPGRGAPLAV 60

Query: 599 VHFRDPYKFKTRKELFIAPEGLYTGQFVYCGKKATLEVGNVMPVGAMPEGTIVCNLEEKM 420
           V+FRDPY+F+  K+LFIA EG+YTGQFVYCG++A L++GNV+P+G MPEGTIVCNLEEK 
Sbjct: 61  VNFRDPYRFRLSKQLFIAAEGMYTGQFVYCGRRAQLQIGNVIPIGLMPEGTIVCNLEEKT 120

Query: 419 GDRGRLARASGNFATVIGHNPDAKRTRVKLPSGAKKVLPSSNRGMVGIVAGGGRIDKPIL 240
           GDRG+LAR SGN+A+VI HNPD KRTRVKLPSGAKKVLPS+NR MVGIVAGGGRIDKPIL
Sbjct: 121 GDRGKLARTSGNYASVIAHNPDTKRTRVKLPSGAKKVLPSANRAMVGIVAGGGRIDKPIL 180

Query: 239 KAGRAYHK 216
           KAGRAYHK
Sbjct: 181 KAGRAYHK 188



 Score =  109 bits (261), Expect = 1e-25
 Identities = 48/51 (94%), Positives = 48/51 (94%)
 Frame = -1

Query: 211 KVKRNCWPYVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTSAGRKVGLIAA 59
           KVKRNCWP VRGVAMNPVEHPHGGGNHQHIGKASTVKRGT  GRKVGLIAA
Sbjct: 190 KVKRNCWPKVRGVAMNPVEHPHGGGNHQHIGKASTVKRGTPPGRKVGLIAA 240


>AY994095-1|AAX86008.1|  144|Anopheles gambiae unknown protein.
          Length = 144

 Score = 27.5 bits (58), Expect = 0.53
 Identities = 13/29 (44%), Positives = 17/29 (58%)
 Frame = -3

Query: 302 SSNRGMVGIVAGGGRIDKPILKAGRAYHK 216
           S+ +  +G V GG   D  IL  GRAYH+
Sbjct: 81  SAGQVPLGAVVGGHTSDGEILYVGRAYHE 109


>AJ439353-4|CAD27926.1|  338|Anopheles gambiae putative hox protein
           protein.
          Length = 338

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 7/15 (46%), Positives = 13/15 (86%)
 Frame = -2

Query: 300 KQQRHGRYCCWRWTY 256
           +QQ+HG++CC R ++
Sbjct: 280 QQQQHGQHCCCRGSH 294


>AJ439060-1|CAD27752.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 671 RHGYIKGVVKDIIHDP 624
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>AJ438610-9|CAD27481.1|  763|Anopheles gambiae hypothetical protein
           protein.
          Length = 763

 Score = 24.6 bits (51), Expect = 3.7
 Identities = 8/16 (50%), Positives = 13/16 (81%)
 Frame = -3

Query: 671 RHGYIKGVVKDIIHDP 624
           R+  +K ++KDI+HDP
Sbjct: 737 RYTMLKDMIKDIMHDP 752


>DQ989013-1|ABK97614.1|  378|Anopheles gambiae gustatory receptor 24
           protein.
          Length = 378

 Score = 23.8 bits (49), Expect = 6.5
 Identities = 14/43 (32%), Positives = 22/43 (51%)
 Frame = +3

Query: 399 CQTTSITHFLFKIAHNGTLRHSSNRHHISNFKSCFLSTINKLA 527
           C+T SIT  +        LRH      +S ++S +L  ++KLA
Sbjct: 180 CETLSITAKILAEDFQRALRHVGPAAKVSEYRSLWL-RLSKLA 221


>AY330177-1|AAQ16283.1|  166|Anopheles gambiae odorant-binding
           protein AgamOBP50 protein.
          Length = 166

 Score = 23.4 bits (48), Expect = 8.6
 Identities = 11/44 (25%), Positives = 18/44 (40%)
 Frame = +3

Query: 507 STINKLACVEPFGSNEELLPCLELVWIAEVYNSQRCTSTRVMDY 638
           S + KL C+ PF  + ++  C +L     +     C  T    Y
Sbjct: 8   SVVGKLTCLSPFLQSIKVASCCQLEAFLTLPTYGNCLQTIAEKY 51


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 931,877
Number of Sequences: 2352
Number of extensions: 20369
Number of successful extensions: 39
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 38
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 87734433
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)