Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_C22
(650 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces po... 78 1e-15
SPCC4B3.01 ||SPCP25A2.01c|thiosulfate sulfurtransferase|Schizosa... 28 1.0
SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma sub... 26 5.4
SPBC30D10.10c |tor1||phosphatidylinositol kinase Tor1|Schizosacc... 26 5.4
SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces pom... 25 7.2
SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces... 25 7.2
SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces pom... 25 9.5
SPBC16E9.03c |||DUF1783 family protein|Schizosaccharomyces pombe... 25 9.5
>SPAC4H3.07c |||protein phosphatase Fmp31 |Schizosaccharomyces
pombe|chr 1|||Manual
Length = 171
Score = 78.2 bits (184), Expect = 1e-15
Identities = 41/97 (42%), Positives = 58/97 (59%)
Frame = -3
Query: 408 YDEVVKAISNNNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRP 229
Y+ + + + +LIDVREPDE K+ G I S N+P+G I + ++SD+EF+KTY
Sbjct: 64 YNLSKRPTGDKSTVLIDVREPDEFKQ-GAIETSYNLPVGKIEEAM-KLSDEEFSKTYGFS 121
Query: 228 KPNQNTELIFYCMVGRRSAKAQESAIKLGFKNTKNXT 118
KP ++ YC GRRS A + KLG+KN N T
Sbjct: 122 KPVFEDNVVVYCRSGRRSTTASDILTKLGYKNIGNYT 158
>SPCC4B3.01 ||SPCP25A2.01c|thiosulfate
sulfurtransferase|Schizosaccharomyces pombe|chr
3|||Manual
Length = 298
Score = 28.3 bits (60), Expect = 1.0
Identities = 27/113 (23%), Positives = 52/113 (46%), Gaps = 16/113 (14%)
Frame = -3
Query: 417 VADYDEVVKAISNNN---ILLIDVREPDE----VKEH------GHIPNSINIPL--GTIS 283
VA +D++VK I + + + ++D R + V E GHIP SINIP T +
Sbjct: 162 VASFDDIVKVIESPDAAGVHIVDARAHERFLGNVPESRPGLASGHIPTSINIPFTETTAA 221
Query: 282 TVLGEMSDKEFNKTY-KRPKPNQNTELIFYCMVGRRSAKAQESAIKLGFKNTK 127
+ +++ K + +++ +I C G ++ + + GFK+ +
Sbjct: 222 GITAPKPEEDLEKVFSSHGLTDKSVPIITSCGSGVTASVLFAALKECGFKDVR 274
>SPBC800.08 |gcd10||translation initiation factor eIF-3 gamma
subunit Gcd10|Schizosaccharomyces pombe|chr 2|||Manual
Length = 462
Score = 25.8 bits (54), Expect = 5.4
Identities = 15/85 (17%), Positives = 38/85 (44%), Gaps = 6/85 (7%)
Frame = -3
Query: 564 IIRKSRTTSAGYLKLNYARKQLSSNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAI 385
+++K + + ++ + LS + IP+S ++L + ETK A ++ + I
Sbjct: 245 LVQKGILKTLNWYQVTNPTETLSEYSVEDIPESELNEMKLRHRKRYETKKATFNRLKNTI 304
Query: 384 SN------NNILLIDVREPDEVKEH 328
+ + + ++ + P V +H
Sbjct: 305 DDFESGNYDALFILSIHTPMSVLQH 329
>SPBC30D10.10c |tor1||phosphatidylinositol kinase
Tor1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2335
Score = 25.8 bits (54), Expect = 5.4
Identities = 12/47 (25%), Positives = 25/47 (53%)
Frame = -3
Query: 336 KEHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFY 196
K +GHI +I + +S+++GE ++ + K ++ E+I Y
Sbjct: 1406 KAYGHIERHRDILVNDLSSIIGESYNRAYGIMVKSQMLSELEEIIDY 1452
>SPBC6B1.10 |prp17||splicing factor Prp17|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 558
Score = 25.4 bits (53), Expect = 7.2
Identities = 11/34 (32%), Positives = 18/34 (52%)
Frame = -3
Query: 405 DEVVKAISNNNILLIDVREPDEVKEHGHIPNSIN 304
+E + ++ IL D+R PD V+ + H IN
Sbjct: 367 NEFLAGTADKRILQFDIRSPDIVQAYDHHLGGIN 400
>SPCC645.05c |myo2|rng5|myosin II heavy chain|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1526
Score = 25.4 bits (53), Expect = 7.2
Identities = 16/61 (26%), Positives = 30/61 (49%), Gaps = 1/61 (1%)
Frame = -3
Query: 528 LKLNYARKQLSSNEYKAIPQSNALSLRLYSE-SKVETKVADYDEVVKAISNNNILLIDVR 352
LK K+ EY+ + + + L SE + + KVAD++ + +S + L+D R
Sbjct: 1291 LKSELESKRKLEVEYQKVLEEVKTTRSLRSEVTLLRNKVADHESIRSKLSEVEMKLVDTR 1350
Query: 351 E 349
+
Sbjct: 1351 K 1351
>SPCP31B10.06 |mug190||C2 domain protein |Schizosaccharomyces
pombe|chr 3|||Manual
Length = 1188
Score = 25.0 bits (52), Expect = 9.5
Identities = 13/39 (33%), Positives = 22/39 (56%)
Frame = -3
Query: 378 NNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMS 262
N +L VR+ +++EH I +NIPL T T +++
Sbjct: 741 NAMLCFTVRD-FKLREHDSILGVVNIPLATTLTTSSQLT 778
>SPBC16E9.03c |||DUF1783 family protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 249
Score = 25.0 bits (52), Expect = 9.5
Identities = 8/27 (29%), Positives = 17/27 (62%)
Frame = +1
Query: 46 SICAFXIHFKTNHFPXLAHSVQLPCXI 126
S+ + +H+++ F +AH V+L C +
Sbjct: 203 SLASGTVHYQSQRFGPIAHWVELDCTL 229
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,276,755
Number of Sequences: 5004
Number of extensions: 41863
Number of successful extensions: 138
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 137
length of database: 2,362,478
effective HSP length: 70
effective length of database: 2,012,198
effective search space used: 293780908
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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