Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C22
         (650 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein p...    28   0.29 
AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative 5'-nucleo...    24   4.8  
AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.    23   8.4  

>AJ439353-10|CAD27932.1| 3325|Anopheles gambiae F25C8.3 protein
           protein.
          Length = 3325

 Score = 27.9 bits (59), Expect = 0.29
 Identities = 13/34 (38%), Positives = 22/34 (64%), Gaps = 2/34 (5%)
 Frame = -3

Query: 585 GRRITQLIIRKSRTTSAGYLK--LNYARKQLSSN 490
           G+R+ Q++  K RTT+ GY +  +NYA + +  N
Sbjct: 538 GKRLQQMMPSKHRTTAEGYTQRPVNYAVETIEHN 571


>AJ237706-1|CAB40347.1|  570|Anopheles gambiae putative
           5'-nucleotidase protein.
          Length = 570

 Score = 23.8 bits (49), Expect = 4.8
 Identities = 10/29 (34%), Positives = 17/29 (58%)
 Frame = -3

Query: 438 ESKVETKVADYDEVVKAISNNNILLIDVR 352
           ++K +T   DY  VVK  +N+ +L+   R
Sbjct: 268 DTKYDTIEGDYPLVVKKSNNHTVLITQAR 296


>AJ535206-1|CAD59406.1| 1376|Anopheles gambiae SMC4 protein protein.
          Length = 1376

 Score = 23.0 bits (47), Expect = 8.4
 Identities = 8/25 (32%), Positives = 18/25 (72%)
 Frame = -2

Query: 565  NNTKVSNYFRGLFEVELCTKTIIIE 491
            N  ++S+Y  G+++V+ CT ++ I+
Sbjct: 1250 NMFELSDYLVGIYKVKDCTDSVTIK 1274


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 555,916
Number of Sequences: 2352
Number of extensions: 9074
Number of successful extensions: 10
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 10
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 64395870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)