Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_C22
(650 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AE014297-3451|AAF56229.2| 148|Drosophila melanogaster CG6000-PA... 113 1e-25
AY070705-1|AAL48176.1| 110|Drosophila melanogaster RH54517p pro... 73 4e-13
AE014297-1577|AAF54857.2| 110|Drosophila melanogaster CG12279-P... 73 4e-13
X07311-1|CAA30276.1| 111|Drosophila melanogaster heat shock pro... 66 5e-11
AE014296-1626|AAF50291.1| 111|Drosophila melanogaster CG4456-PB... 66 5e-11
AE014296-1625|AAN11961.1| 111|Drosophila melanogaster CG4456-PA... 66 5e-11
Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax prot... 29 4.1
Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax prot... 29 4.1
Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trit... 29 4.1
Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trit... 29 4.1
M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein ( D.me... 29 4.1
AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE... 29 4.1
AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC... 29 4.1
AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB... 29 4.1
AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD... 29 4.1
AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA... 29 4.1
M65178-1|AAA28738.1| 606|Drosophila melanogaster oskar protein. 28 9.6
M63492-1|AAA28739.1| 606|Drosophila melanogaster maternal effec... 28 9.6
D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine rece... 28 9.6
D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine rece... 28 9.6
D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine rece... 28 9.6
D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine rece... 28 9.6
AE014297-838|AAF54306.1| 606|Drosophila melanogaster CG10901-PA... 28 9.6
AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD... 28 9.6
AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC... 28 9.6
AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB... 28 9.6
AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA... 28 9.6
>AE014297-3451|AAF56229.2| 148|Drosophila melanogaster CG6000-PA,
isoform A protein.
Length = 148
Score = 113 bits (273), Expect = 1e-25
Identities = 65/135 (48%), Positives = 83/135 (61%)
Frame = -3
Query: 528 LKLNYARKQLSSNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILLIDVRE 349
+ L AR Q+ + + QSN L R YS++ + + DYD V K S LLIDVRE
Sbjct: 2 MALRVARSQIPFSTARNT-QSNLLQ-RFYSQAP-QIGIVDYDVVKKLPSEPQKLLIDVRE 58
Query: 348 PDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPKPNQNTELIFYCMVGRRSAK 169
P+E+KE G IP SINIPLG +S L S++ F Y R KP TE+IF+C +G+RS K
Sbjct: 59 PEELKETGQIPASINIPLGVVSQELA-ASEQLFKSKYGREKPKPETEIIFHCKIGKRSLK 117
Query: 168 AQESAIKLGFKNTKN 124
A E+A LGFKN KN
Sbjct: 118 AAEAAAALGFKNVKN 132
>AY070705-1|AAL48176.1| 110|Drosophila melanogaster RH54517p
protein.
Length = 110
Score = 72.5 bits (170), Expect = 4e-13
Identities = 40/97 (41%), Positives = 55/97 (56%)
Frame = -3
Query: 417 VADYDEVVKAISNNNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 238
+A Y+EV ++ L DVR E+KE G +P SINIPL + L + +++F +TY
Sbjct: 1 MATYEEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPLSELEKALN-LPEEDFAQTY 59
Query: 237 KRPKPNQNTELIFYCMVGRRSAKAQESAIKLGFKNTK 127
R KP + LIF C G R+A+A A LGF N K
Sbjct: 60 GRVKPAVDAVLIFSCKAGGRAARAANLASTLGFTNAK 96
>AE014297-1577|AAF54857.2| 110|Drosophila melanogaster CG12279-PA
protein.
Length = 110
Score = 72.5 bits (170), Expect = 4e-13
Identities = 40/97 (41%), Positives = 55/97 (56%)
Frame = -3
Query: 417 VADYDEVVKAISNNNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 238
+A Y+EV ++ L DVR E+KE G +P SINIPL + L + +++F +TY
Sbjct: 1 MATYEEVKDIPNHPEKYLFDVRNESELKETGVLPASINIPLSELEKALN-LPEEDFAQTY 59
Query: 237 KRPKPNQNTELIFYCMVGRRSAKAQESAIKLGFKNTK 127
R KP + LIF C G R+A+A A LGF N K
Sbjct: 60 GRVKPAVDAVLIFSCKAGGRAARAANLASTLGFTNAK 96
>X07311-1|CAA30276.1| 111|Drosophila melanogaster heat shock
protein protein.
Length = 111
Score = 65.7 bits (153), Expect = 5e-11
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = -3
Query: 417 VADYDEVVKAISNNNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 238
+A Y++V ++ ++ LIDVR +E+++ G IP SINIPL + L + F Y
Sbjct: 1 MATYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKAL-NLDGSAFKNKY 59
Query: 237 KRPKPNQNTELIFYCMVGRRSAKAQESAIKLGFKN 133
R KP + + +IF C G R +A++ A G+ N
Sbjct: 60 GRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGYSN 94
>AE014296-1626|AAF50291.1| 111|Drosophila melanogaster CG4456-PB,
isoform B protein.
Length = 111
Score = 65.7 bits (153), Expect = 5e-11
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = -3
Query: 417 VADYDEVVKAISNNNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 238
+A Y++V ++ ++ LIDVR +E+++ G IP SINIPL + L + F Y
Sbjct: 1 MATYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKAL-NLDGSAFKNKY 59
Query: 237 KRPKPNQNTELIFYCMVGRRSAKAQESAIKLGFKN 133
R KP + + +IF C G R +A++ A G+ N
Sbjct: 60 GRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGYSN 94
>AE014296-1625|AAN11961.1| 111|Drosophila melanogaster CG4456-PA,
isoform A protein.
Length = 111
Score = 65.7 bits (153), Expect = 5e-11
Identities = 33/95 (34%), Positives = 53/95 (55%)
Frame = -3
Query: 417 VADYDEVVKAISNNNILLIDVREPDEVKEHGHIPNSINIPLGTISTVLGEMSDKEFNKTY 238
+A Y++V ++ ++ LIDVR +E+++ G IP SINIPL + L + F Y
Sbjct: 1 MATYEQVKDVPNHPDVYLIDVRRKEELQQTGFIPASINIPLDELDKAL-NLDGSAFKNKY 59
Query: 237 KRPKPNQNTELIFYCMVGRRSAKAQESAIKLGFKN 133
R KP + + +IF C G R +A++ A G+ N
Sbjct: 60 GRSKPEKQSPIIFTCRSGNRVLEAEKIAKSQGYSN 94
>Z50152-2|CAA90514.1| 3358|Drosophila melanogaster trithorax protein
trxI protein.
Length = 3358
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1537 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1594
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1595 -PNSKEVQLG 1603
>Z50152-1|CAA90513.1| 3726|Drosophila melanogaster trithorax protein
trxII protein.
Length = 3726
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1905 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1962
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1963 -PNSKEVQLG 1971
>Z31725-2|CAA83515.1| 3358|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3358
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1537 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1594
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1595 -PNSKEVQLG 1603
>Z31725-1|CAA83516.1| 3726|Drosophila melanogaster predicted trithorax
protein protein.
Length = 3726
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1905 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1962
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1963 -PNSKEVQLG 1971
>M31617-1|AAA29025.1| 3759|Drosophila melanogaster protein (
D.melanogaster zinc-binding protein (trithorax) mRNA,
complete cds. ).
Length = 3759
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1905 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1962
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1963 -PNSKEVQLG 1971
>AE014297-1828|AAX52951.1| 3358|Drosophila melanogaster CG8651-PE,
isoform E protein.
Length = 3358
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1537 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1594
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1595 -PNSKEVQLG 1603
>AE014297-1827|AAN13601.1| 3358|Drosophila melanogaster CG8651-PC,
isoform C protein.
Length = 3358
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1537 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1594
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1595 -PNSKEVQLG 1603
>AE014297-1826|AAN13600.1| 3358|Drosophila melanogaster CG8651-PB,
isoform B protein.
Length = 3358
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1537 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1594
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1595 -PNSKEVQLG 1603
>AE014297-1825|AAN13599.1| 3726|Drosophila melanogaster CG8651-PD,
isoform D protein.
Length = 3726
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1905 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1962
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1963 -PNSKEVQLG 1971
>AE014297-1824|AAF55041.2| 3726|Drosophila melanogaster CG8651-PA,
isoform A protein.
Length = 3726
Score = 29.5 bits (63), Expect = 4.1
Identities = 25/70 (35%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Frame = -3
Query: 495 SNEYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILL--IDVREPDEVKEHGH 322
S+ Y+A+ N L RLY SK K+ +Y V I N++ L +DV V +H +
Sbjct: 1905 SDSYEAVVPINFLCSRLYWSSKEPWKIVEY-TVRTTIQNSSSTLTALDVGRNYTV-DHTN 1962
Query: 321 IPNSINIPLG 292
PNS + LG
Sbjct: 1963 -PNSKEVQLG 1971
>M65178-1|AAA28738.1| 606|Drosophila melanogaster oskar protein.
Length = 606
Score = 28.3 bits (60), Expect = 9.6
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 2/150 (1%)
Frame = -3
Query: 588 CGRRITQLIIRKSRTTSAGYLKLNYARKQLSSNEYKAIPQSNALSLRLYSESKVETKVAD 409
CG R ++ +T K+ +L+S + Q + RL+S +++ TK
Sbjct: 71 CGERFRKIFKSARKTELPELWKVPLVAHELTSRQSS---QQLQVVARLFSSTQISTKEIT 127
Query: 408 YDEVVKAISNNNILLIDVREPDEVKEHGHIPNSIN-IPLGTISTVLGEMSDK-EFNKTYK 235
Y+ S NN+ +I+ +E+ I + + I L + S K E+ K
Sbjct: 128 YNSNSNT-SENNMTIIESNYISVREEYPDIDSEVRAILLSHAQNGITISSIKSEYRKLTG 186
Query: 234 RPKPNQNTELIFYCMVGRRSAKAQESAIKL 145
P P + F + +A+ ES ++
Sbjct: 187 NPFPLHDNVTDFLLTIPNVTAECSESGKRI 216
>M63492-1|AAA28739.1| 606|Drosophila melanogaster maternal effect
protein protein.
Length = 606
Score = 28.3 bits (60), Expect = 9.6
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 2/150 (1%)
Frame = -3
Query: 588 CGRRITQLIIRKSRTTSAGYLKLNYARKQLSSNEYKAIPQSNALSLRLYSESKVETKVAD 409
CG R ++ +T K+ +L+S + Q + RL+S +++ TK
Sbjct: 71 CGERFRKIFKSARKTELPELWKVPLVAHELTSRQSS---QQLQVVARLFSSTQISTKEIT 127
Query: 408 YDEVVKAISNNNILLIDVREPDEVKEHGHIPNSIN-IPLGTISTVLGEMSDK-EFNKTYK 235
Y+ S NN+ +I+ +E+ I + + I L + S K E+ K
Sbjct: 128 YNSNSNT-SENNMTIIESNYISVREEYPDIDSEVRAILLSHAQNGITISSIKSEYRKLTG 186
Query: 234 RPKPNQNTELIFYCMVGRRSAKAQESAIKL 145
P P + F + +A+ ES ++
Sbjct: 187 NPFPLHDNVTDFLLTIPNVTAECSESGKRI 216
>D17389-4|BAA04212.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4438 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4466
>D17389-3|BAA41471.1| 5112|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5112
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4438 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4466
>D17389-2|BAA41470.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4452 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4480
>D17389-1|BAA41469.1| 5126|Drosophila melanogaster ryanodine receptor
homologue protein.
Length = 5126
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4452 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4480
>AE014297-838|AAF54306.1| 606|Drosophila melanogaster CG10901-PA,
isoform A protein.
Length = 606
Score = 28.3 bits (60), Expect = 9.6
Identities = 32/150 (21%), Positives = 60/150 (40%), Gaps = 2/150 (1%)
Frame = -3
Query: 588 CGRRITQLIIRKSRTTSAGYLKLNYARKQLSSNEYKAIPQSNALSLRLYSESKVETKVAD 409
CG R ++ +T K+ +L+S + Q + RL+S +++ TK
Sbjct: 71 CGERFRKIFKSARKTELPELWKVPLVAHELTSRQSS---QQLQVVARLFSSTQISTKEIT 127
Query: 408 YDEVVKAISNNNILLIDVREPDEVKEHGHIPNSIN-IPLGTISTVLGEMSDK-EFNKTYK 235
Y+ S NN+ +I+ +E+ I + + I L + S K E+ K
Sbjct: 128 YNSNSNT-SENNMTIIESNYISVREEYPDIDSEVRAILLSHAQNGITISSIKSEYRKLTG 186
Query: 234 RPKPNQNTELIFYCMVGRRSAKAQESAIKL 145
P P + F + +A+ ES ++
Sbjct: 187 NPFPLHDNVTDFLLTIPNVTAECSESGKRI 216
>AE013599-723|AAM71084.1| 5113|Drosophila melanogaster CG10844-PD,
isoform D protein.
Length = 5113
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4439 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4467
>AE013599-722|AAM71083.1| 5127|Drosophila melanogaster CG10844-PC,
isoform C protein.
Length = 5127
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4453 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4481
>AE013599-721|AAM71082.1| 5113|Drosophila melanogaster CG10844-PB,
isoform B protein.
Length = 5113
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4439 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4467
>AE013599-720|AAF59036.2| 5127|Drosophila melanogaster CG10844-PA,
isoform A protein.
Length = 5127
Score = 28.3 bits (60), Expect = 9.6
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +1
Query: 235 LVGFIK--FFI*HFTKYS*YCT*RYIYTI 315
+VGF K F+I ++T Y+ +C RYI+ I
Sbjct: 4453 IVGFFKIIFYIFYYTGYAHFCVVRYIFGI 4481
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,876,959
Number of Sequences: 53049
Number of extensions: 394347
Number of successful extensions: 929
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 894
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 923
length of database: 24,988,368
effective HSP length: 82
effective length of database: 20,638,350
effective search space used: 2765538900
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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