Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C22
         (650 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U41027-2|AAV28335.1|  447|Caenorhabditis elegans Hypothetical pr...    29   2.9  
Z68216-2|CAA92460.2|  367|Caenorhabditis elegans Hypothetical pr...    28   5.0  
Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical pr...    28   6.6  
Z77657-2|CAB01146.1|  147|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U49829-2|AAA93383.1|  183|Caenorhabditis elegans Hypothetical pr...    28   6.6  
U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protei...    28   6.6  

>U41027-2|AAV28335.1|  447|Caenorhabditis elegans Hypothetical
           protein R08E3.4a protein.
          Length = 447

 Score = 29.1 bits (62), Expect = 2.9
 Identities = 18/46 (39%), Positives = 25/46 (54%), Gaps = 1/46 (2%)
 Frame = -3

Query: 498 SSNEYKAIPQSNALSLRLYSESKVET-KVADYDEVVKAISNNNILL 364
           S +E    P +N  SL L  + K  T +  D + VV  I+NNN+LL
Sbjct: 386 SPSEQSHSPPANESSLSLTEKEKSPTPEKEDEENVVCVIANNNLLL 431


>Z68216-2|CAA92460.2|  367|Caenorhabditis elegans Hypothetical
           protein F27C8.2 protein.
          Length = 367

 Score = 28.3 bits (60), Expect = 5.0
 Identities = 19/77 (24%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
 Frame = -3

Query: 402 EVVKAISNNNILLIDVREPDEVK-EHGHIPNSINIPLGTISTVLGEMSDKEFNKTYKRPK 226
           ++V A   N    + +    E++ E GHIP+ +  PL   ST + E+  ++  K +  P+
Sbjct: 245 QIVAAFDENTGSCVGISILREIQNEDGHIPDLLIAPLHAKSTAIAEILLQKSLKKHYNPE 304

Query: 225 PNQNTELIFYCMVGRRS 175
            + + + + +  + RRS
Sbjct: 305 DDYDFD-VDHLAIYRRS 320


>Z81498-1|CAB04086.1|  692|Caenorhabditis elegans Hypothetical
           protein F11A6.1a protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -3

Query: 507 KQLSSNEYKAIPQSNALSLRLYSE----SKVETKVADYDEVVKAI 385
           +Q   + YK IP  N L L+LYS+       E KV+ Y E V+AI
Sbjct: 519 RQFYPSRYKNIPNGNRLQLQLYSDGCYGGADENKVS-YVEHVQAI 562


>Z77657-2|CAB01146.1|  147|Caenorhabditis elegans Hypothetical
           protein F08H9.3 protein.
          Length = 147

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/66 (28%), Positives = 34/66 (51%), Gaps = 1/66 (1%)
 Frame = -3

Query: 528 LKLNYARKQLSSN-EYKAIPQSNALSLRLYSESKVETKVADYDEVVKAISNNNILLIDVR 352
           LK+N   ++LS   E++ I   N  + + YS+S V  +  D   +   +S +  LLI+V 
Sbjct: 65  LKINLEGRKLSIKAEHQEIENDNISTTQTYSKSIVLPEDVDVTHLSSNLSEDGKLLIEVP 124

Query: 351 EPDEVK 334
           + +  K
Sbjct: 125 KVEAKK 130


>U49829-2|AAA93383.1|  183|Caenorhabditis elegans Hypothetical
           protein F27D9.4 protein.
          Length = 183

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 17/56 (30%), Positives = 30/56 (53%), Gaps = 4/56 (7%)
 Frame = +1

Query: 64  IHFKTNHFPXL----AHSVQLPCXILCIFKSKLYSTFLSLSRSSPNHTIKYQFSIL 219
           ++ K N FP      +HS  LP    C  K+ + S  LSL+ ++ +H+++   SI+
Sbjct: 63  LNLKLNAFPRSFINSSHSPLLPQKYACFSKNAVVSLALSLAENTTDHSLEPLPSII 118


>U12682-1|AAB63525.1|  692|Caenorhabditis elegans celfurPC protein
           protein.
          Length = 692

 Score = 27.9 bits (59), Expect = 6.6
 Identities = 19/45 (42%), Positives = 25/45 (55%), Gaps = 4/45 (8%)
 Frame = -3

Query: 507 KQLSSNEYKAIPQSNALSLRLYSE----SKVETKVADYDEVVKAI 385
           +Q   + YK IP  N L L+LYS+       E KV+ Y E V+AI
Sbjct: 519 RQFYPSRYKNIPNGNRLQLQLYSDGCYGGADENKVS-YVEHVQAI 562


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,253,229
Number of Sequences: 27780
Number of extensions: 219359
Number of successful extensions: 623
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 613
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 623
length of database: 12,740,198
effective HSP length: 79
effective length of database: 10,545,578
effective search space used: 1444744186
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)