Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C21
         (711 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_01_0152 - 1070249-1070296,1070443-1070515,1070601-1070671,107...    49   3e-06
01_06_0302 - 28318910-28318999,28319118-28319210,28319303-283193...    30   2.1  
09_02_0496 - 9892242-9892499,9892956-9893045,9893046-9893094,989...    28   6.4  
05_03_0076 + 8164466-8164511,8164643-8164698,8165529-8165867,816...    28   6.4  

>02_01_0152 -
           1070249-1070296,1070443-1070515,1070601-1070671,
           1070768-1070874,1071836-1072007
          Length = 156

 Score = 49.2 bits (112), Expect = 3e-06
 Identities = 26/73 (35%), Positives = 38/73 (52%)
 Frame = -1

Query: 327 INFNIGKIDRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEEL 148
           ++FN+GK DR    V              S +CK+  S  S F V CC+KG+L+E+N+ L
Sbjct: 73  VDFNVGKSDRSEMKVTGKRKRNAQHLQENSALCKVCTSSNS-FVVRCCVKGSLLEINDRL 131

Query: 147 VQNPLLLKNMPDD 109
           ++ P LL     D
Sbjct: 132 IKQPDLLNTSWSD 144


>01_06_0302 -
           28318910-28318999,28319118-28319210,28319303-28319383,
           28319483-28319633,28319716-28319783,28319989-28320143,
           28320268-28320326,28320649-28320899
          Length = 315

 Score = 29.9 bits (64), Expect = 2.1
 Identities = 13/22 (59%), Positives = 15/22 (68%)
 Frame = -1

Query: 234 ICKIEFSDESVFEVPCCMKGTL 169
           IC+ E  DES  E PCC KG+L
Sbjct: 61  ICQEE-GDESYMETPCCCKGSL 81


>09_02_0496 -
           9892242-9892499,9892956-9893045,9893046-9893094,
           9893330-9893557,9894095-9894261,9894312-9894395,
           9894614-9894820,9894919-9895251,9895371-9895513,
           9895607-9895723,9895824-9895980,9896054-9896157,
           9896272-9896432,9896518-9896707,9896732-9896834,
           9896950-9897231,9897327-9897649,9897750-9897786,
           9898109-9898162,9898292-9898368,9898449-9898502,
           9898738-9898822,9900289-9900426,9900592-9900603
          Length = 1150

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 16/49 (32%), Positives = 24/49 (48%)
 Frame = -1

Query: 579 QLIYI*IRKHSFVIMKTMDFNILDSIPDLDNLKTFTERYFSKRYLINVD 433
           Q++Y   R H     K++ F  L+ I   D L+  T R   K+Y I+ D
Sbjct: 227 QVVYSGPRDHVLEFFKSLGFKCLERIGVADFLQEVTSRKDQKQYWIHGD 275


>05_03_0076 +
           8164466-8164511,8164643-8164698,8165529-8165867,
           8165938-8166012,8166674-8166846,8168697-8168795,
           8169002-8169161,8169321-8169464,8169551-8169723,
           8169796-8169991,8170061-8170258,8170864-8171016,
           8171838-8171959,8172037-8172136,8172221-8172316,
           8172400-8172530,8173717-8173819,8174373-8174555,
           8174632-8174724,8174818-8174853,8175672-8175773,
           8176310-8176472,8176557-8176678,8176994-8177158,
           8177667-8177849,8178679-8178831,8179136-8179288,
           8179373-8179444,8179530-8179664,8179739-8179800,
           8179999-8180096,8180628-8180737,8180832-8181005,
           8181092-8181157,8181847-8181915,8181989-8182099,
           8182418-8182558,8182638-8182766,8182864-8183029,
           8183174-8183388,8184883-8185089,8185501-8185572,
           8185897-8186010,8186090-8186281,8186489-8186569,
           8186654-8186728,8186812-8186878,8187292-8187452,
           8187943-8188116,8188209-8188337,8188421-8188504,
           8188589-8188650,8188728-8188800,8189008-8189142,
           8189790-8189960,8190054-8190319,8190440-8190458
          Length = 2448

 Score = 28.3 bits (60), Expect = 6.4
 Identities = 14/41 (34%), Positives = 22/41 (53%)
 Frame = -2

Query: 134 CC*KTCQMTDGLSAKEASXESQGRSDKKGGVQRRKRTENVL 12
           CC K   +   LSA  +S  S  R ++ GG +RR+  E ++
Sbjct: 517 CCCKL--VAHSLSASSSSQFSSNRPNRMGGAKRRRLVEEIV 555


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 15,053,577
Number of Sequences: 37544
Number of extensions: 254720
Number of successful extensions: 582
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 570
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 581
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1839213168
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)