Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_C21
(711 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
BC015795-1|AAH15795.1| 181|Homo sapiens chromosome 9 open readi... 70 7e-12
AL354797-3|CAI39467.1| 181|Homo sapiens chromosome 9 open readi... 70 7e-12
AK000464-1|BAA91183.1| 181|Homo sapiens protein ( Homo sapiens ... 70 7e-12
AF153417-1|AAG43367.1| 181|Homo sapiens chromosome 9 open readi... 70 7e-12
AL354797-5|CAI39469.1| 129|Homo sapiens chromosome 9 open readi... 49 2e-05
AL354797-4|CAI39468.1| 115|Homo sapiens chromosome 9 open readi... 40 0.012
>BC015795-1|AAH15795.1| 181|Homo sapiens chromosome 9 open reading
frame 6 protein.
Length = 181
Score = 70.1 bits (164), Expect = 7e-12
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Frame = -1
Query: 480 TFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHTFFSKDEHYK-INFNIG-K 307
+ +RYF++ Y +V G D I+ HSNRI +++LA SH + K I++ I
Sbjct: 14 SLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQISTN 73
Query: 306 IDRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLL 127
RL N V + +CKI SD + V C++G L+EVNE ++ P +L
Sbjct: 74 CSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRLMEVNENILHKPSIL 133
Query: 126 KNMP 115
+ P
Sbjct: 134 QEKP 137
>AL354797-3|CAI39467.1| 181|Homo sapiens chromosome 9 open reading
frame 6 protein.
Length = 181
Score = 70.1 bits (164), Expect = 7e-12
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Frame = -1
Query: 480 TFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHTFFSKDEHYK-INFNIG-K 307
+ +RYF++ Y +V G D I+ HSNRI +++LA SH + K I++ I
Sbjct: 14 SLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQISTN 73
Query: 306 IDRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLL 127
RL N V + +CKI SD + V C++G L+EVNE ++ P +L
Sbjct: 74 CSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRLMEVNENILHKPSIL 133
Query: 126 KNMP 115
+ P
Sbjct: 134 QEKP 137
>AK000464-1|BAA91183.1| 181|Homo sapiens protein ( Homo sapiens
cDNA FLJ20457 fis, clone KAT05844. ).
Length = 181
Score = 70.1 bits (164), Expect = 7e-12
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Frame = -1
Query: 480 TFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHTFFSKDEHYK-INFNIG-K 307
+ +RYF++ Y +V G D I+ HSNRI +++LA SH + K I++ I
Sbjct: 14 SLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQISTN 73
Query: 306 IDRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLL 127
RL N V + +CKI SD + V C++G L+EVNE ++ P +L
Sbjct: 74 CSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRLMEVNENILHKPSIL 133
Query: 126 KNMP 115
+ P
Sbjct: 134 QEKP 137
>AF153417-1|AAG43367.1| 181|Homo sapiens chromosome 9 open reading
frame 6 protein.
Length = 181
Score = 70.1 bits (164), Expect = 7e-12
Identities = 40/124 (32%), Positives = 62/124 (50%), Gaps = 2/124 (1%)
Frame = -1
Query: 480 TFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHTFFSKDEHYK-INFNIG-K 307
+ +RYF++ Y +V G D I+ HSNRI +++LA SH + K I++ I
Sbjct: 14 SLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQISTN 73
Query: 306 IDRLNNSVXXXXXXXXXXXXXXSVICKIEFSDESVFEVPCCMKGTLVEVNEELVQNPLLL 127
RL N V + +CKI SD + V C++G L+EVNE ++ P +L
Sbjct: 74 CSRLQNKVSGKFKRGAQFLTELAPLCKIYCSDGEEYTVSSCVRGRLMEVNENILHKPSIL 133
Query: 126 KNMP 115
+ P
Sbjct: 134 QEKP 137
>AL354797-5|CAI39469.1| 129|Homo sapiens chromosome 9 open reading
frame 6 protein.
Length = 129
Score = 48.8 bits (111), Expect = 2e-05
Identities = 28/93 (30%), Positives = 44/93 (47%), Gaps = 2/93 (2%)
Frame = -1
Query: 387 IALLSLAPSHTFFSKDEHYK-INFNIG-KIDRLNNSVXXXXXXXXXXXXXXSVICKIEFS 214
I +++LA SH + K I++ I RL N V + +CKI S
Sbjct: 10 ICVITLAESHPVLQSGKTIKSISYQISTNCSRLQNKVSGKFKRGAQFLTELAPLCKIYCS 69
Query: 213 DESVFEVPCCMKGTLVEVNEELVQNPLLLKNMP 115
D + V C++G L+EVNE ++ P +L+ P
Sbjct: 70 DGEEYTVSSCVRGRLMEVNENILHKPSILQEKP 102
>AL354797-4|CAI39468.1| 115|Homo sapiens chromosome 9 open reading
frame 6 protein.
Length = 115
Score = 39.5 bits (88), Expect = 0.012
Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 2/68 (2%)
Frame = -1
Query: 480 TFTERYFSKRYLINVDGIKNNDMMIMFHSNRIALLSLAPSHTFFSKDEHYK-INFNIG-K 307
+ +RYF++ Y +V G D I+ HSNRI +++LA SH + K I++ I
Sbjct: 14 SLVDRYFTRWYKPDVKGKFCEDHCILQHSNRICVITLAESHPVLQSGKTIKSISYQISTN 73
Query: 306 IDRLNNSV 283
RL N V
Sbjct: 74 CSRLQNKV 81
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 82,228,850
Number of Sequences: 237096
Number of extensions: 1432808
Number of successful extensions: 2696
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 2594
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2692
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8287202872
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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