Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C15
         (508 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z30423-7|CAA83010.2|  164|Caenorhabditis elegans Hypothetical pr...    59   2e-09
AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical ...    31   0.63 
AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical...    28   4.5  
Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical pr...    27   5.9  
Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical pr...    27   5.9  

>Z30423-7|CAA83010.2|  164|Caenorhabditis elegans Hypothetical
           protein T20G5.9 protein.
          Length = 164

 Score = 59.3 bits (137), Expect = 2e-09
 Identities = 24/58 (41%), Positives = 34/58 (58%)
 Frame = -3

Query: 506 TQRPDGTWRXPRRIKEGYVPQEEVPLYESKGKQFRARQNDGLPVGLTPEIVAQAQKKK 333
           TQR DGTWR  RR+K GY+PQ+E P Y++K +         +P G+ P  +A    +K
Sbjct: 34  TQRADGTWRKARRVKGGYIPQDEQPKYQNKMQLEATNGRSSVPAGVNPRAMASGSSRK 91


>AF106592-4|AAK21366.1|  786|Caenorhabditis elegans Hypothetical
           protein D1037.1 protein.
          Length = 786

 Score = 30.7 bits (66), Expect = 0.63
 Identities = 15/48 (31%), Positives = 28/48 (58%)
 Frame = -2

Query: 147 KTPQESQKKA*RNRVSRGKNKSRACXRAXRKSKTEKQGKNRXERLTRK 4
           KT   S+ ++     SRG+++ R   R  RKS++  + K+R E++ +K
Sbjct: 68  KTWSSSRSRSRSRSRSRGRSQERRRSRKSRKSRSRSRLKHREEKIEKK 115


>AL032626-23|CAE17974.1|   88|Caenorhabditis elegans Hypothetical
          protein Y37D8A.26 protein.
          Length = 88

 Score = 27.9 bits (59), Expect = 4.5
 Identities = 10/16 (62%), Positives = 13/16 (81%)
 Frame = +2

Query: 2  NFLVNLSCLFLPCFSV 49
          NF + ++CLFLPCF V
Sbjct: 46 NFALFITCLFLPCFIV 61


>Z99281-6|CAB54458.2|  625|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9b protein.
          Length = 625

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -2

Query: 138 QESQKKA*RNRVSRGKNKSRACXRAXRKSKTEKQGKN 28
           QES K++    V RG++KSR+  R+  +S++  + ++
Sbjct: 154 QESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRS 190


>Z99281-5|CAB54457.1|  553|Caenorhabditis elegans Hypothetical
           protein Y57G11C.9a protein.
          Length = 553

 Score = 27.5 bits (58), Expect = 5.9
 Identities = 12/37 (32%), Positives = 24/37 (64%)
 Frame = -2

Query: 138 QESQKKA*RNRVSRGKNKSRACXRAXRKSKTEKQGKN 28
           QES K++    V RG++KSR+  R+  +S++  + ++
Sbjct: 154 QESSKRSASPPVRRGRSKSRSRSRSPSRSRSRSRSRS 190


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,246,394
Number of Sequences: 27780
Number of extensions: 157570
Number of successful extensions: 505
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 482
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 505
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 977860456
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)