Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_C14
(604 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter... 26 0.33
AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter... 26 0.33
AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamat... 24 1.3
AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamat... 24 1.3
AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein. 24 1.3
DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex det... 23 1.7
DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor pro... 22 4.0
DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex det... 21 9.3
AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase prot... 21 9.3
>AY395072-1|AAQ96728.1| 593|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 593
Score = 25.8 bits (54), Expect = 0.33
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 346 YPCCWW 363
YPCCWW
Sbjct: 486 YPCCWW 491
>AY395071-1|AAQ96727.1| 646|Apis mellifera GABA neurotransmitter
transporter-1B protein.
Length = 646
Score = 25.8 bits (54), Expect = 0.33
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 346 YPCCWW 363
YPCCWW
Sbjct: 539 YPCCWW 544
>AY463910-1|AAR24352.1| 843|Apis mellifera metabotropic glutamate
receptor 1 protein.
Length = 843
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 220 KC*VEDRFLTFLFFAIGNAILLYVSPAVVV 309
KC ++D ++FLF + NA+L+ +S V
Sbjct: 666 KCNIQD--MSFLFSQLYNALLILISTVYAV 693
>AB161181-1|BAD08343.1| 933|Apis mellifera metabotropic glutamate
receptor protein.
Length = 933
Score = 23.8 bits (49), Expect = 1.3
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 220 KC*VEDRFLTFLFFAIGNAILLYVSPAVVV 309
KC ++D ++FLF + NA+L+ +S V
Sbjct: 756 KCNIQD--MSFLFSQLYNALLILISTVYAV 783
>AB047034-1|BAB64310.1| 1598|Apis mellifera mblk-1 protein.
Length = 1598
Score = 23.8 bits (49), Expect = 1.3
Identities = 8/26 (30%), Positives = 18/26 (69%)
Frame = -1
Query: 313 EKQQPLEKRKARLHYQSRKRGMLEND 236
++QQP ++++ + Q ++RG + ND
Sbjct: 837 QQQQPQQQQQQQQQQQQQQRGPMTND 862
>DQ325121-1|ABD14135.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 406 NALKNVQKVAFSSNTTNNMDTTYMEIPLYDV 314
++L N K + +N NN +T Y ++ Y++
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325120-1|ABD14134.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 406 NALKNVQKVAFSSNTTNNMDTTYMEIPLYDV 314
++L N K + +N NN +T Y ++ Y++
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325119-1|ABD14133.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 406 NALKNVQKVAFSSNTTNNMDTTYMEIPLYDV 314
++L N K + +N NN +T Y ++ Y++
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325118-1|ABD14132.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 406 NALKNVQKVAFSSNTTNNMDTTYMEIPLYDV 314
++L N K + +N NN +T Y ++ Y++
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325117-1|ABD14131.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 406 NALKNVQKVAFSSNTTNNMDTTYMEIPLYDV 314
++L N K + +N NN +T Y ++ Y++
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325116-1|ABD14130.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 406 NALKNVQKVAFSSNTTNNMDTTYMEIPLYDV 314
++L N K + +N NN +T Y ++ Y++
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ325114-1|ABD14128.1| 181|Apis mellifera complementary sex
determiner protein.
Length = 181
Score = 23.4 bits (48), Expect = 1.7
Identities = 9/31 (29%), Positives = 18/31 (58%)
Frame = -1
Query: 406 NALKNVQKVAFSSNTTNNMDTTYMEIPLYDV 314
++L N K + +N NN +T Y ++ Y++
Sbjct: 83 SSLSNNYKYSNYNNYNNNYNTNYKKLQYYNI 113
>DQ151547-1|ABA39280.1| 405|Apis mellifera tyramine receptor
protein.
Length = 405
Score = 22.2 bits (45), Expect = 4.0
Identities = 9/29 (31%), Positives = 18/29 (62%)
Frame = +3
Query: 3 RFPRXSGGRSAILSSFLACFLRRFIISLS 89
R + +G + ++ F+AC+L FI+ L+
Sbjct: 300 RETKTAGTLAVVVGGFVACWLPFFILYLA 328
>DQ325090-1|ABD14104.1| 178|Apis mellifera complementary sex
determiner protein.
Length = 178
Score = 21.0 bits (42), Expect = 9.3
Identities = 8/31 (25%), Positives = 15/31 (48%)
Frame = -1
Query: 412 SYNALKNVQKVAFSSNTTNNMDTTYMEIPLY 320
+YN N K + N N++ + +P+Y
Sbjct: 93 NYNNYNNYNKKLYYKNYIINIEQIPVPVPIY 123
>AY242387-1|AAO72539.2| 693|Apis mellifera prophenoloxidase
protein.
Length = 693
Score = 21.0 bits (42), Expect = 9.3
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -2
Query: 540 KNDHLYLFDLISKPFY 493
K+ LYLFD S+P Y
Sbjct: 5 KSGILYLFDRPSEPVY 20
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 166,259
Number of Sequences: 438
Number of extensions: 3527
Number of successful extensions: 15
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 15
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 15
length of database: 146,343
effective HSP length: 55
effective length of database: 122,253
effective search space used: 17726685
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -