Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C12
         (701 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

03_01_0014 + 113638-113754,113836-113950,114570-114835,115365-11...    33   0.17 
12_01_0541 + 4251931-4254141                                           28   6.2  
01_07_0254 + 42318181-42319471,42319581-42319792,42319909-423201...    28   6.2  
03_03_0013 - 13743730-13744239,13745337-13745564,13745656-13745733     28   8.3  

>03_01_0014 +
           113638-113754,113836-113950,114570-114835,115365-115575,
           115915-115979,118723-118930,119457-119566,119663-119913,
           120250-120356,120442-120509,120624-120701,121070-121198,
           121341-121481,122297-122344,122648-122743,124071-124183,
           124441-124591,124745-124818,124913-125072,125356-125454,
           125532-125618,125761-125907
          Length = 946

 Score = 33.5 bits (73), Expect = 0.17
 Identities = 13/23 (56%), Positives = 19/23 (82%)
 Frame = -3

Query: 483 FELLSRLREGRVPVNITCIILNY 415
           F+LL R +EGR+PV+I C+I N+
Sbjct: 763 FDLLYRWQEGRLPVDINCVISNH 785


>12_01_0541 + 4251931-4254141
          Length = 736

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +3

Query: 69  LKFILAYPLIFFVILIRSFNLFFLFMKIVWLCFLV 173
           L  +L+YP + + I +     F   M +VW CFL+
Sbjct: 65  LALMLSYPAVSYTIGLMQSGSFRNDMVVVWACFLL 99


>01_07_0254 +
           42318181-42319471,42319581-42319792,42319909-42320132,
           42320232-42321009
          Length = 834

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 12/32 (37%), Positives = 20/32 (62%)
 Frame = -1

Query: 167 KTQPNNFHEQKKKIERPNKNYEKYQRISQNEL 72
           KTQ    H QK+K +  +++Y K +++ Q EL
Sbjct: 716 KTQEKE-HRQKRKADHASRDYNKRRKVLQREL 746


>03_03_0013 - 13743730-13744239,13745337-13745564,13745656-13745733
          Length = 271

 Score = 27.9 bits (59), Expect = 8.3
 Identities = 20/62 (32%), Positives = 26/62 (41%)
 Frame = +3

Query: 516 GVKLMAKDSVLNATLKVQSRLTKLESIPNNNEKKVICRNQNPYLLTQTMKHSVIIYXNNN 695
           GV +  +D       K   R     SIPN  +   I +  NP+L      H  IIY NN+
Sbjct: 111 GVVIFVRDGEYKVCRKAPCRWVNYTSIPNAKKNSKINKRGNPHL------H--IIYKNNS 162

Query: 696 NI 701
            I
Sbjct: 163 QI 164


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,130,653
Number of Sequences: 37544
Number of extensions: 236234
Number of successful extensions: 424
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 417
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 424
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1803843684
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)