Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C12
         (701 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p pro...    30   3.5  
AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-P...    30   3.5  
AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-P...    30   3.5  

>AY122128-1|AAM52640.1| 1188|Drosophila melanogaster GH22749p
           protein.
          Length = 1188

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -1

Query: 254 VRIKFMP*KSK*RLLLVITTPSIKNGLN*KTQPNNFHEQKKKIERPNKNYEKYQRISQNE 75
           +R+K    K++ R L     PS++  +          EQKK  +   K Y+K Q+  +NE
Sbjct: 787 IRLKRCNLKTQKRSLKAEEAPSVQEDILSMNSDRELQEQKKAQKPKRKRYKKVQKEQENE 846


>AE014296-2482|AAN11790.1| 1188|Drosophila melanogaster CG12316-PB,
           isoform B protein.
          Length = 1188

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -1

Query: 254 VRIKFMP*KSK*RLLLVITTPSIKNGLN*KTQPNNFHEQKKKIERPNKNYEKYQRISQNE 75
           +R+K    K++ R L     PS++  +          EQKK  +   K Y+K Q+  +NE
Sbjct: 787 IRLKRCNLKTQKRSLKAEEAPSVQEDILSMNSDRELQEQKKAQKPKRKRYKKVQKEQENE 846


>AE014296-2481|AAF49660.1| 1188|Drosophila melanogaster CG12316-PA,
           isoform A protein.
          Length = 1188

 Score = 29.9 bits (64), Expect = 3.5
 Identities = 17/60 (28%), Positives = 28/60 (46%)
 Frame = -1

Query: 254 VRIKFMP*KSK*RLLLVITTPSIKNGLN*KTQPNNFHEQKKKIERPNKNYEKYQRISQNE 75
           +R+K    K++ R L     PS++  +          EQKK  +   K Y+K Q+  +NE
Sbjct: 787 IRLKRCNLKTQKRSLKAEEAPSVQEDILSMNSDRELQEQKKAQKPKRKRYKKVQKEQENE 846


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,581,531
Number of Sequences: 53049
Number of extensions: 474107
Number of successful extensions: 1078
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1033
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1076
length of database: 24,988,368
effective HSP length: 83
effective length of database: 20,585,301
effective search space used: 3087795150
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)