Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C10
         (669 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase p...    25   1.6  
EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calc...    25   2.9  
CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein ...    25   2.9  
CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal ...    23   6.6  
AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.    23   8.7  

>AJ010194-1|CAA09033.1|  684|Anopheles gambiae prophenoloxidase
           protein.
          Length = 684

 Score = 25.4 bits (53), Expect = 1.6
 Identities = 9/17 (52%), Positives = 13/17 (76%)
 Frame = -3

Query: 637 TIGNLNEFGRPMKKMAT 587
           ++G+L EF RP + MAT
Sbjct: 653 SVGSLQEFARPYRNMAT 669


>EF990672-1|ABS30733.1|  466|Anopheles gambiae voltage-gated calcium
           channel beta subunitprotein.
          Length = 466

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 10/23 (43%), Positives = 15/23 (65%)
 Frame = -3

Query: 286 EALNHPYFLSRTKNAELPIYLKI 218
           + +NHP  L++T  A   +YLKI
Sbjct: 336 DTINHPSQLAKTSLAPTIVYLKI 358


>CR954256-7|CAJ14148.1| 1087|Anopheles gambiae predicted protein
           protein.
          Length = 1087

 Score = 24.6 bits (51), Expect = 2.9
 Identities = 13/46 (28%), Positives = 23/46 (50%)
 Frame = -3

Query: 343 IPKIIPKDSYPSGWVPPKEEALNHPYFLSRTKNAELPIYLKITYRG 206
           +  ++PK+S P+G+        NHP+ L    N  L +++ I   G
Sbjct: 675 LESLLPKESEPAGFSLSATLFTNHPHRLEIIPNL-LRVFVSIEMTG 719


>CR954257-6|CAJ14157.1|  375|Anopheles gambiae RrnaAD, ribosomal RNA
           adenine dimethylaseprotein.
          Length = 375

 Score = 23.4 bits (48), Expect = 6.6
 Identities = 11/39 (28%), Positives = 21/39 (53%)
 Frame = -3

Query: 469 SKHYSSYGKSPFVRKIKEQYNYEIEKNPPEWEYVKRLLP 353
           SKH+  +  +   +K++  +   IE    EW Y+ R++P
Sbjct: 178 SKHFLPWCTTGGTKKLRTLHKKLIEDGAEEW-YLVRIVP 215


>AJ535205-1|CAD59405.1| 1201|Anopheles gambiae SMC3 protein protein.
          Length = 1201

 Score = 23.0 bits (47), Expect = 8.7
 Identities = 10/26 (38%), Positives = 13/26 (50%)
 Frame = +3

Query: 504 APKSSELFKIRPFFPTKSRANAECVR 581
           A K  EL ++RP +    R   EC R
Sbjct: 338 AEKEKELEQVRPRYEAMRRKEEECSR 363


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,640
Number of Sequences: 2352
Number of extensions: 12376
Number of successful extensions: 58
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 57
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 58
length of database: 563,979
effective HSP length: 62
effective length of database: 418,155
effective search space used: 66904800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)