Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C06
         (638 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_UPI00006CCFBF Cluster: hypothetical protein TTHERM_0018...    33   5.8  

>UniRef50_UPI00006CCFBF Cluster: hypothetical protein
           TTHERM_00188580; n=2; Tetrahymena thermophila SB210|Rep:
           hypothetical protein TTHERM_00188580 - Tetrahymena
           thermophila SB210
          Length = 932

 Score = 33.1 bits (72), Expect = 5.8
 Identities = 32/103 (31%), Positives = 50/103 (48%), Gaps = 5/103 (4%)
 Frame = -1

Query: 623 FTSDXNFGFPFLNHRILVRNDVI*NKPVNLELI*ISSACAIVV*SIL--FKY---SR*TL 459
           FT + NF  P L +  L++N +I N   N+  + +S    + +  +L  F+Y   +  TL
Sbjct: 527 FTKESNF--PTLYNCTLIKNGIITNN--NILFLEMSKQFLVEITRVLYMFRYFPENGNTL 582

Query: 458 MPYVNVRFSCSISYFIMI*ITRTYLCVKNYVNDTS*KICNVNY 330
             Y+        SYF  I  T+T +CV+    DTS +I N  Y
Sbjct: 583 TSYIVAGQKIQFSYFQYINPTQTLICVQ----DTSIQILNYQY 621


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 514,437,766
Number of Sequences: 1657284
Number of extensions: 9167263
Number of successful extensions: 13901
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 13379
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13901
length of database: 575,637,011
effective HSP length: 97
effective length of database: 414,880,463
effective search space used: 47711253245
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)