Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C05
         (705 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC007059-2|AAD19817.1|  893|Homo sapiens Human homolog of Mus mu...    30   7.0  
AC007059-1|AAD19818.1| 1568|Homo sapiens Human homolog of Mus mu...    30   7.0  
AC006128-1|AAC97985.1|  786|Homo sapiens Human homolog of Mus mu...    30   7.0  

>AC007059-2|AAD19817.1|  893|Homo sapiens Human homolog of Mus
           musculus wizS protein [AA 64-934] protein.
          Length = 893

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 532 RGSGGDPS-PLLRSNPLICHRDSDPRHPERRSPRNTL 639
           +G G  PS PLL+  PL       P++PE +SP+ +L
Sbjct: 217 KGLGHPPSSPLLKKTPLALAGSPTPKNPEDKSPQLSL 253


>AC007059-1|AAD19818.1| 1568|Homo sapiens Human homolog of Mus
            musculus wizL protein [AA 4-1561] protein.
          Length = 1568

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 532  RGSGGDPS-PLLRSNPLICHRDSDPRHPERRSPRNTL 639
            +G G  PS PLL+  PL       P++PE +SP+ +L
Sbjct: 892  KGLGHPPSSPLLKKTPLALAGSPTPKNPEDKSPQLSL 928


>AC006128-1|AAC97985.1|  786|Homo sapiens Human homolog of Mus
           musculus wizS protein [AA 171-934] protein.
          Length = 786

 Score = 30.3 bits (65), Expect = 7.0
 Identities = 15/37 (40%), Positives = 22/37 (59%), Gaps = 1/37 (2%)
 Frame = +1

Query: 532 RGSGGDPS-PLLRSNPLICHRDSDPRHPERRSPRNTL 639
           +G G  PS PLL+  PL       P++PE +SP+ +L
Sbjct: 110 KGLGHPPSSPLLKKTPLALAGSPTPKNPEDKSPQLSL 146


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 101,271,241
Number of Sequences: 237096
Number of extensions: 2231880
Number of successful extensions: 5116
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 4922
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5108
length of database: 76,859,062
effective HSP length: 88
effective length of database: 55,994,614
effective search space used: 8175213644
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)