Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C04
         (476 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal ion/p...    25   1.4  
AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1 pro...    24   3.1  
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.            22   9.6  
AF043436-1|AAC05661.1|  263|Anopheles gambiae putative pupal-spe...    22   9.6  

>AY170874-1|AAO34131.1| 1221|Anopheles gambiae alkali metal
           ion/proton exchanger 3 protein.
          Length = 1221

 Score = 25.0 bits (52), Expect = 1.4
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 332 HVRIIVNIKTFILKIIAYSTCYLVACSEIIISTKC 436
           HVR+I  I  F++  +AY    +   S I+  T C
Sbjct: 471 HVRVIEPIFIFVMAYLAYLNAEIFHMSGILAITFC 505


>AF281078-1|AAF82131.1| 2051|Anopheles gambiae vitellogenin 1
           protein.
          Length = 2051

 Score = 23.8 bits (49), Expect = 3.1
 Identities = 9/28 (32%), Positives = 16/28 (57%)
 Frame = +1

Query: 319 KHINSRTNNCQYQNIYPKDYCLQYMLLS 402
           KH+N R  + QY   + +D+  + + LS
Sbjct: 874 KHLNPRDFSLQYSGTFLRDFAFKELELS 901


>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
          Length = 3398

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 9/22 (40%), Positives = 13/22 (59%)
 Frame = +1

Query: 313  KTKHINSRTNNCQYQNIYPKDY 378
            +T + N  T N QYQ +  K+Y
Sbjct: 1787 RTIYANDPTENKQYQGLPGKEY 1808


>AF043436-1|AAC05661.1|  263|Anopheles gambiae putative
           pupal-specific cuticular proteinCP2c protein.
          Length = 263

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 421 YQYKMPQLPKHRGPQIYE 474
           YQ+  P + +H  P IY+
Sbjct: 56  YQHSAPAIYQHSAPAIYQ 73



 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 421 YQYKMPQLPKHRGPQIYE 474
           YQ+  P + +H  P IY+
Sbjct: 64  YQHSAPAIYQHSAPAIYQ 81



 Score = 22.2 bits (45), Expect = 9.6
 Identities = 7/18 (38%), Positives = 11/18 (61%)
 Frame = +1

Query: 421 YQYKMPQLPKHRGPQIYE 474
           YQ+  P + +H  P IY+
Sbjct: 72  YQHSAPAIYQHSAPAIYQ 89


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 446,605
Number of Sequences: 2352
Number of extensions: 8495
Number of successful extensions: 10
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 8
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 10
length of database: 563,979
effective HSP length: 59
effective length of database: 425,211
effective search space used: 42095889
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)