Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_C04
(476 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z37092-6|CAE46667.1| 334|Caenorhabditis elegans Hypothetical pr... 29 2.3
Z37092-5|CAA85456.1| 336|Caenorhabditis elegans Hypothetical pr... 29 2.3
U00065-2|AAL27237.1| 672|Caenorhabditis elegans Prion-like-(q/n... 28 3.0
AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical ... 27 5.3
Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical pr... 27 7.0
Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical pr... 27 7.0
M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiport... 27 7.0
AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H... 27 7.0
AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H... 27 7.0
Z77136-1|CAB00880.1| 606|Caenorhabditis elegans Hypothetical pr... 27 9.2
AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine re... 27 9.2
>Z37092-6|CAE46667.1| 334|Caenorhabditis elegans Hypothetical
protein F44F4.5b protein.
Length = 334
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = -3
Query: 381 AIIFRINVLILTIIRT*VNVLSFILCCKCLF---LKEMYFKSNY*FIYAIL*LFV 226
+++ RINV+I+TI V +++FIL K LF ++ ++ S +Y L LFV
Sbjct: 22 SLLLRINVIIMTI----VAIITFILTYKALFILKIRPIFHSSTKILLYTSL-LFV 71
>Z37092-5|CAA85456.1| 336|Caenorhabditis elegans Hypothetical
protein F44F4.5a protein.
Length = 336
Score = 28.7 bits (61), Expect = 2.3
Identities = 20/55 (36%), Positives = 33/55 (60%), Gaps = 3/55 (5%)
Frame = -3
Query: 381 AIIFRINVLILTIIRT*VNVLSFILCCKCLF---LKEMYFKSNY*FIYAIL*LFV 226
+++ RINV+I+TI V +++FIL K LF ++ ++ S +Y L LFV
Sbjct: 22 SLLLRINVIIMTI----VAIITFILTYKALFILKIRPIFHSSTKILLYTSL-LFV 71
>U00065-2|AAL27237.1| 672|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 25
protein.
Length = 672
Score = 28.3 bits (60), Expect = 3.0
Identities = 13/29 (44%), Positives = 20/29 (68%), Gaps = 2/29 (6%)
Frame = +2
Query: 377 IAYSTCYLVACS--EIIISTKCHNYLNIG 457
I ST V+CS ++ IS +C+NY++IG
Sbjct: 374 ICVSTFCSVSCSTNQVCISNQCYNYVSIG 402
>AF038604-2|AAB92013.1| 468|Caenorhabditis elegans Hypothetical
protein B0546.3 protein.
Length = 468
Score = 27.5 bits (58), Expect = 5.3
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 84 NIYNLF*LFVQISIPHFSSYKICFIYIVYKTTFMLP 191
+ Y F F Q+S +FSS+ + FIY +Y T P
Sbjct: 418 SFYLYFPRFFQVS-HNFSSFSVLFIYCIYYPTKKCP 452
>Z73898-3|CAC42390.2| 606|Caenorhabditis elegans Hypothetical
protein ZK822.3c protein.
Length = 606
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 335 VRIIVNIKTFILKIIAYSTCYLVACSEIIISTKC 436
VRI+ + F+L +AY T +V+ S II C
Sbjct: 206 VRILAPVFIFVLPYMAYLTAEMVSLSSIIAIAIC 239
>Z73898-2|CAC42388.1| 667|Caenorhabditis elegans Hypothetical
protein ZK822.3b protein.
Length = 667
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 335 VRIIVNIKTFILKIIAYSTCYLVACSEIIISTKC 436
VRI+ + F+L +AY T +V+ S II C
Sbjct: 266 VRILAPVFIFVLPYMAYLTAEMVSLSSIIAIAIC 299
>Z73898-1|CAC42389.1| 647|Caenorhabditis elegans Hypothetical
protein ZK822.3a protein.
Length = 647
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 335 VRIIVNIKTFILKIIAYSTCYLVACSEIIISTKC 436
VRI+ + F+L +AY T +V+ S II C
Sbjct: 246 VRILAPVFIFVLPYMAYLTAEMVSLSSIIAIAIC 279
>Z49867-1|CAA90027.1| 312|Caenorhabditis elegans Hypothetical
protein C33D3.3 protein.
Length = 312
Score = 27.1 bits (57), Expect = 7.0
Identities = 8/30 (26%), Positives = 18/30 (60%)
Frame = +1
Query: 1 SSLVCSXCYNVTSLTNLRVRNLRIKNCRIF 90
++++CS CY S ++ + L +NC ++
Sbjct: 141 TAIICSHCYPYNSYSHPKTTKLVCRNCHLY 170
>M23064-1|AAA27892.1| 609|Caenorhabditis elegans Na+/H+ antiporter
protein.
Length = 609
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 335 VRIIVNIKTFILKIIAYSTCYLVACSEIIISTKC 436
VRI+ + F+L +AY T +V+ S II C
Sbjct: 209 VRILAPVFIFVLPYMAYLTAEMVSLSSIIAIAIC 242
>AF497835-1|AAM18113.1| 647|Caenorhabditis elegans putative Na-H
exchanger isoform 9b protein.
Length = 647
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 335 VRIIVNIKTFILKIIAYSTCYLVACSEIIISTKC 436
VRI+ + F+L +AY T +V+ S II C
Sbjct: 246 VRILAPVFIFVLPYMAYLTAEMVSLSSIIAIAIC 279
>AF497834-1|AAM18112.1| 667|Caenorhabditis elegans putative Na-H
exchanger isoform 9a protein.
Length = 667
Score = 27.1 bits (57), Expect = 7.0
Identities = 13/34 (38%), Positives = 19/34 (55%)
Frame = +2
Query: 335 VRIIVNIKTFILKIIAYSTCYLVACSEIIISTKC 436
VRI+ + F+L +AY T +V+ S II C
Sbjct: 266 VRILAPVFIFVLPYMAYLTAEMVSLSSIIAIAIC 299
>Z77136-1|CAB00880.1| 606|Caenorhabditis elegans Hypothetical
protein ZC376.1 protein.
Length = 606
Score = 26.6 bits (56), Expect = 9.2
Identities = 8/26 (30%), Positives = 14/26 (53%)
Frame = +1
Query: 310 YKTKHINSRTNNCQYQNIYPKDYCLQ 387
+K + + +C Y N++ YCLQ
Sbjct: 92 FKNGFVGEISEDCLYANVFTNQYCLQ 117
>AF016419-2|AAG24055.2| 325|Caenorhabditis elegans Serpentine
receptor, class j protein32 protein.
Length = 325
Score = 26.6 bits (56), Expect = 9.2
Identities = 9/18 (50%), Positives = 12/18 (66%)
Frame = +3
Query: 150 CFIYIVYKTTFMLPNYSY 203
CFIY+ Y F L NY++
Sbjct: 24 CFIYLTYAEKFKLGNYAF 41
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 9,657,765
Number of Sequences: 27780
Number of extensions: 181799
Number of successful extensions: 389
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 384
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 387
length of database: 12,740,198
effective HSP length: 76
effective length of database: 10,628,918
effective search space used: 871571276
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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