Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C01
         (817 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory recept...    23   2.9  
AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless prot...    23   2.9  
AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholo...    23   2.9  
DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11 pro...    22   5.1  
AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory recept...    22   6.7  
AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory recept...    22   6.7  
AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory recept...    22   6.7  
AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like prote...    21   8.9  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   8.9  

>AM292382-1|CAL23194.2|  670|Tribolium castaneum gustatory receptor
           candidate 61 protein.
          Length = 670

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 7/20 (35%), Positives = 13/20 (65%)
 Frame = -2

Query: 585 ERQKRRSQDLRFDVCQQKHD 526
           +++K RS +   D+C + HD
Sbjct: 221 DKKKSRSDEQTIDICMRCHD 240


>AF225975-2|AAF74116.1|  302|Tribolium castaneum Tc-tailless
           protein.
          Length = 302

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/41 (26%), Positives = 15/41 (36%)
 Frame = +3

Query: 588 CHVASHDDAVIDIVHRHHAGFTRHVCVYDVGQSKARAHHNR 710
           C        +ID  HR+     R     +VG +K    H R
Sbjct: 74  CKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNKDAVQHER 114


>AF219117-1|AAF71999.1|  406|Tribolium castaneum tailless ortholog
           protein.
          Length = 406

 Score = 23.0 bits (47), Expect = 2.9
 Identities = 11/41 (26%), Positives = 15/41 (36%)
 Frame = +3

Query: 588 CHVASHDDAVIDIVHRHHAGFTRHVCVYDVGQSKARAHHNR 710
           C        +ID  HR+     R     +VG +K    H R
Sbjct: 74  CKAKDEGSCIIDKTHRNQCRACRLKKCQNVGMNKDAVQHER 114


>DQ659251-1|ABG47449.1|  366|Tribolium castaneum chitinase 11
           protein.
          Length = 366

 Score = 22.2 bits (45), Expect = 5.1
 Identities = 10/32 (31%), Positives = 17/32 (53%)
 Frame = -3

Query: 212 QVIFNFDVASINWVEYINVWCLGIRKYLLEDN 117
           QV + +D    NWV Y +   +G++    +DN
Sbjct: 303 QVPYKYD--GTNWVSYDDEQSIGLKAKYAKDN 332


>AM292368-1|CAL23180.2|  387|Tribolium castaneum gustatory receptor
           candidate 47 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 606 RGWLRDSERQKRRSQDLRFDVCQQKHDHFRADSEI 502
           RG  R  E QKR   D +      +HD F  D ++
Sbjct: 24  RGSARAQEIQKRSELDSKDGHVIDEHDQFFRDHKL 58


>AM292347-1|CAL23159.2|  387|Tribolium castaneum gustatory receptor
           candidate 26 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 606 RGWLRDSERQKRRSQDLRFDVCQQKHDHFRADSEI 502
           RG  R  E QKR   D +      +HD F  D ++
Sbjct: 24  RGSARAQEIQKRSELDSKDGHVIDEHDQFFRDHKL 58


>AM292327-1|CAL23139.2|  387|Tribolium castaneum gustatory receptor
           candidate 6 protein.
          Length = 387

 Score = 21.8 bits (44), Expect = 6.7
 Identities = 12/35 (34%), Positives = 16/35 (45%)
 Frame = -2

Query: 606 RGWLRDSERQKRRSQDLRFDVCQQKHDHFRADSEI 502
           RG  R  E QKR   D +      +HD F  D ++
Sbjct: 24  RGSARAQEIQKRSELDSKDGHVIDEHDQFFRDHKL 58


>AY600513-1|AAT11861.1|  314|Tribolium castaneum spalt-like protein
           protein.
          Length = 314

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 12/48 (25%), Positives = 21/48 (43%)
 Frame = -2

Query: 525 HFRADSEIRSRVCRQNAKSQSSLGRLCGIHGEPHAVPPVNLDPAVPAC 382
           H+R  +  R   C+   ++ ++ G L    G   A PP+ +    P C
Sbjct: 153 HYRTHTGERPFKCKICGRAFTTKGNLKTHMGVHRAKPPMRVLHQCPVC 200


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 8.9
 Identities = 11/40 (27%), Positives = 18/40 (45%)
 Frame = -2

Query: 528 DHFRADSEIRSRVCRQNAKSQSSLGRLCGIHGEPHAVPPV 409
           D+   D E+ S +       ++S   +CG HG    +P V
Sbjct: 11  DNPPCDDEVESCIAVGVGSGRNSAPSICGEHGHCVNLPGV 50


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,820
Number of Sequences: 336
Number of extensions: 4608
Number of successful extensions: 14
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 14
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 22310335
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)