Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_C01
         (817 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical ...   120   2e-27
Z77665-1|CAB01220.1|  339|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical pr...    29   3.0  
Z82086-2|CAB04995.2|  309|Caenorhabditis elegans Hypothetical pr...    29   5.3  

>AF098505-1|AAC67415.1|  536|Caenorhabditis elegans Hypothetical
           protein Y71H10A.2 protein.
          Length = 536

 Score =  120 bits (288), Expect = 2e-27
 Identities = 69/233 (29%), Positives = 120/233 (51%), Gaps = 1/233 (0%)
 Frame = -3

Query: 809 DLPICIVRPAVVIGAYYEPMPGWLDKTCLFGANAIVVSPGLGLTHVIYADXXXXXXXXXV 630
           D+P+ I+RP++V   +  P+PGW D   + G   I  + G G+   +            V
Sbjct: 222 DIPVIIIRPSIVGAMWQGPLPGWTDN--INGPTGIFAAVGRGVLTNMCGSSESKADIIPV 279

Query: 629 DYVNNSIIV-AGYVTANVRSDVPKIYALTSVSRNMITFGQIQKYALEFAAKMPSPKALWD 453
           D V N II  A Y T+   +++P I+  +S   N + +G I  +  +F  K P  +    
Sbjct: 280 DIVANMIIASASYRTSINTTEIPVIHC-SSGELNPLYWGHIVLFLEQFYKKYPMEQCFAV 338

Query: 452 VFVVFTASPTLFLLLTWILQYLPAYIVDTFLKVTGNKPRFVDVNTKVYKTNVALSYFSSK 273
               F  S +LFL+  +I  ++PA I D   ++ G +   V + +KV+K    L +F+++
Sbjct: 339 PSTYFHKSRSLFLINYYIKHHIPAAISDISARLIGKRKNNVKLYSKVWKMIETLHFFTTR 398

Query: 272 TWYFQDKNMEELFNNLSKTDQVIFNFDVASINWVEYINVWCLGIRKYLLEDNL 114
            W F  + + E F  ++  DQ  +NFDV  ++W  Y+  + +GI+K+LL++NL
Sbjct: 399 GWSFNARGLPEFFEKMTPADQKEYNFDVRQVDWNSYLFDYVMGIKKFLLKENL 451


>Z77665-1|CAB01220.1|  339|Caenorhabditis elegans Hypothetical
           protein K02E11.2 protein.
          Length = 339

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 18/54 (33%), Positives = 30/54 (55%)
 Frame = -3

Query: 272 TWYFQDKNMEELFNNLSKTDQVIFNFDVASINWVEYINVWCLGIRKYLLEDNLT 111
           T Y Q +N+E +F++L K     F   V + +W+E++ V+ L I    +  NLT
Sbjct: 17  TSYIQAENLENVFDSLLK-----FEIAVLAFSWLEFLYVFYLLIFIRAMHFNLT 65


>Z93397-2|CAB07717.2|  505|Caenorhabditis elegans Hypothetical
           protein ZC482.3 protein.
          Length = 505

 Score = 29.5 bits (63), Expect = 3.0
 Identities = 15/34 (44%), Positives = 20/34 (58%)
 Frame = +1

Query: 13  TPKLFQTQSTRNINLTSLALXKPIRFLWAYSASV 114
           T  LF T + +N NLTSLA    I+F+ A +  V
Sbjct: 374 TEYLFGTVTVKNTNLTSLASLDKIKFIGALNGDV 407


>Z82086-2|CAB04995.2|  309|Caenorhabditis elegans Hypothetical
           protein ZK228.3 protein.
          Length = 309

 Score = 28.7 bits (61), Expect = 5.3
 Identities = 12/35 (34%), Positives = 19/35 (54%)
 Frame = +1

Query: 217 VFDRLLNNSSMFLSWKYQVFDEKYDRATFVLYTFV 321
           VFD+L+N S     W +Q +D ++    F  Y F+
Sbjct: 11  VFDQLINLSGELNGWAHQPYDYRFYSENFDEYWFI 45


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,525,647
Number of Sequences: 27780
Number of extensions: 431782
Number of successful extensions: 1315
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1250
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1313
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2008899418
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)