BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_B23
(764 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant r... 25 3.4
AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein. 25 3.4
>AF364132-1|AAL35508.1| 397|Anopheles gambiae putative odorant
receptor Or4 protein.
Length = 397
Score = 24.6 bits (51), Expect = 3.4
Identities = 8/24 (33%), Positives = 12/24 (50%)
Frame = +3
Query: 411 IKICSYNINWKTLKFCVKLGHSVL 482
+ +C Y N K + C +GH L
Sbjct: 197 VVMCGYVCNLKVMTICCSIGHCTL 220
>AF063021-4|AAC16248.1| 93|Anopheles gambiae unknown protein.
Length = 93
Score = 24.6 bits (51), Expect = 3.4
Identities = 15/58 (25%), Positives = 22/58 (37%)
Frame = -1
Query: 236 CAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQT 63
C A R +S + + R W P +C+ L +A S L S+ Q T
Sbjct: 2 CTSCAWRCARASPSRPILTTRGRRWPRPPTSCWPSRRSRLCIIALSLTLSSSSCKQST 59
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 786,329
Number of Sequences: 2352
Number of extensions: 15199
Number of successful extensions: 34
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 34
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 63
effective length of database: 415,803
effective search space used: 79418373
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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