Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_B23
(764 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
D38047-1|BAA07237.1| 257|Homo sapiens 26S proteasome subunit p3... 301 2e-81
BC065006-1|AAH65006.2| 257|Homo sapiens proteasome (prosome, ma... 301 2e-81
BC001164-1|AAH01164.3| 257|Homo sapiens proteasome (prosome, ma... 301 2e-81
AC005789-1|AAC62833.1| 257|Homo sapiens PP31_HUMAN protein. 301 2e-81
BT019688-1|AAV38494.1| 257|Homo sapiens proteasome (prosome, ma... 296 6e-80
X65293-1|CAA46388.1| 737|Homo sapiens protein kinase C epsilon... 32 2.6
BC109034-1|AAI09035.1| 737|Homo sapiens protein kinase C, epsil... 32 2.6
BC109033-1|AAI09034.1| 737|Homo sapiens protein kinase C, epsil... 32 2.6
AC017006-1|AAX93253.1| 258|Homo sapiens unknown protein. 32 2.6
BC032477-1|AAH32477.1| 294|Homo sapiens TMC4 protein protein. 31 3.4
BC025323-1|AAH25323.1| 706|Homo sapiens transmembrane channel-l... 31 3.4
AY236492-1|AAP69870.1| 712|Homo sapiens transmembrane channel-l... 31 3.4
AY263166-1|AAP78781.1| 706|Homo sapiens TMC4 protein protein. 31 6.0
>D38047-1|BAA07237.1| 257|Homo sapiens 26S proteasome subunit p31
protein.
Length = 257
Score = 301 bits (739), Expect = 2e-81
Identities = 143/243 (58%), Positives = 181/243 (74%)
Frame = -1
Query: 761 LDKCGELLNKIKIALTQLTFLPSNNVAANQKELILARDVLEIGAQWAVAVKDVKAFERYM 582
L KCGE L ++K+ L +L FLP+ +++LILARD+LEIGAQW++ KD+ +FERYM
Sbjct: 16 LSKCGEELGRLKLVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYM 75
Query: 581 SQLKCYYFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRTDLYIRH 402
+QLKCYYFDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T++YI+H
Sbjct: 76 AQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKH 135
Query: 401 PLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTIPCAEAA 222
P++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I EA
Sbjct: 136 PVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEAT 195
Query: 221 RRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTIEDARQL 42
R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q IE ARQL
Sbjct: 196 RILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVIEYARQL 253
Query: 41 EMI 33
EMI
Sbjct: 254 EMI 256
>BC065006-1|AAH65006.2| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 301 bits (739), Expect = 2e-81
Identities = 143/243 (58%), Positives = 181/243 (74%)
Frame = -1
Query: 761 LDKCGELLNKIKIALTQLTFLPSNNVAANQKELILARDVLEIGAQWAVAVKDVKAFERYM 582
L KCGE L ++K+ L +L FLP+ +++LILARD+LEIGAQW++ KD+ +FERYM
Sbjct: 16 LSKCGEELGRLKLVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYM 75
Query: 581 SQLKCYYFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRTDLYIRH 402
+QLKCYYFDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T++YI+H
Sbjct: 76 AQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKH 135
Query: 401 PLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTIPCAEAA 222
P++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I EA
Sbjct: 136 PVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEAT 195
Query: 221 RRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTIEDARQL 42
R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q IE ARQL
Sbjct: 196 RILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVIEYARQL 253
Query: 41 EMI 33
EMI
Sbjct: 254 EMI 256
>BC001164-1|AAH01164.3| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 301 bits (739), Expect = 2e-81
Identities = 143/243 (58%), Positives = 181/243 (74%)
Frame = -1
Query: 761 LDKCGELLNKIKIALTQLTFLPSNNVAANQKELILARDVLEIGAQWAVAVKDVKAFERYM 582
L KCGE L ++K+ L +L FLP+ +++LILARD+LEIGAQW++ KD+ +FERYM
Sbjct: 16 LSKCGEELGRLKLVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYM 75
Query: 581 SQLKCYYFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRTDLYIRH 402
+QLKCYYFDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T++YI+H
Sbjct: 76 AQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKH 135
Query: 401 PLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTIPCAEAA 222
P++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I EA
Sbjct: 136 PVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEAT 195
Query: 221 RRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTIEDARQL 42
R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q IE ARQL
Sbjct: 196 RILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVIEYARQL 253
Query: 41 EMI 33
EMI
Sbjct: 254 EMI 256
>AC005789-1|AAC62833.1| 257|Homo sapiens PP31_HUMAN protein.
Length = 257
Score = 301 bits (739), Expect = 2e-81
Identities = 143/243 (58%), Positives = 181/243 (74%)
Frame = -1
Query: 761 LDKCGELLNKIKIALTQLTFLPSNNVAANQKELILARDVLEIGAQWAVAVKDVKAFERYM 582
L KCGE L ++K+ L +L FLP+ +++LILARD+LEIGAQW++ KD+ +FERYM
Sbjct: 16 LSKCGEELGRLKLVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYM 75
Query: 581 SQLKCYYFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRTDLYIRH 402
+QLKCYYFDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T++YI+H
Sbjct: 76 AQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKH 135
Query: 401 PLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTIPCAEAA 222
P++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I EA
Sbjct: 136 PVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEAT 195
Query: 221 RRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTIEDARQL 42
R L ++ + + +Y KKR W LGP+N Y F S++ +PS ELA+Q IE ARQL
Sbjct: 196 RILFFNTPKKMTDYAKKRGWVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVIEYARQL 253
Query: 41 EMI 33
EMI
Sbjct: 254 EMI 256
>BT019688-1|AAV38494.1| 257|Homo sapiens proteasome (prosome,
macropain) 26S subunit, non-ATPase, 8 protein.
Length = 257
Score = 296 bits (726), Expect = 6e-80
Identities = 142/243 (58%), Positives = 180/243 (74%)
Frame = -1
Query: 761 LDKCGELLNKIKIALTQLTFLPSNNVAANQKELILARDVLEIGAQWAVAVKDVKAFERYM 582
L KCGE L ++K+ L +L FLP+ +++LILARD+LEIGAQW++ KD+ +FERYM
Sbjct: 16 LSKCGEELGRLKLVLLELNFLPTTGTKLTKQQLILARDILEIGAQWSILRKDIPSFERYM 75
Query: 581 SQLKCYYFDYKDHLPESAFTNQXXXXXXXXXLSQNRVAEFHTELERLPVDVIRTDLYIRH 402
+QLKCYYFDYK+ LPESA+ +Q LSQNRVAEFHTELERLP I+T++YI+H
Sbjct: 76 AQLKCYYFDYKEQLPESAYMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDIQTNVYIKH 135
Query: 401 PLALEQYLMEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTIPCAEAA 222
P++LEQYLMEGSYNK+FLAKGN+PAESYTFF+D LL+T+R EIA CIEKAY I EA
Sbjct: 136 PVSLEQYLMEGSYNKVFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEAT 195
Query: 221 RRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTIEDARQL 42
R L ++ + + +Y KKR LGP+N Y F S++ +PS ELA+Q IE ARQL
Sbjct: 196 RILFFNTPKKMTDYAKKRGCVLGPNNYYSFASQQ--QKPEDTTIPSTELAKQVIEYARQL 253
Query: 41 EMI 33
EMI
Sbjct: 254 EMI 256
>X65293-1|CAA46388.1| 737|Homo sapiens protein kinase C epsilon
protein.
Length = 737
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 341 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 514
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 507 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 564
>BC109034-1|AAI09035.1| 737|Homo sapiens protein kinase C, epsilon
protein.
Length = 737
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 341 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 514
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 507 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 564
>BC109033-1|AAI09034.1| 737|Homo sapiens protein kinase C, epsilon
protein.
Length = 737
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 341 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 514
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 507 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 564
>AC017006-1|AAX93253.1| 258|Homo sapiens unknown protein.
Length = 258
Score = 31.9 bits (69), Expect = 2.6
Identities = 19/58 (32%), Positives = 27/58 (46%)
Frame = +2
Query: 341 PLLRIFCCSCPPLNTVLEQAGV*YKDLFL*HQLEDAQVLCETRPLGFEKAGIIDSILT 514
P R + L Q GV Y+DL L + L DA+ C+ G K GI++ + T
Sbjct: 28 PRSRFYAAEVTSALMFLHQHGVIYRDLKLDNILLDAEGHCKLADFGMCKEGILNGVTT 85
>BC032477-1|AAH32477.1| 294|Homo sapiens TMC4 protein protein.
Length = 294
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 583 MYLSKALTSFTATAHCAPISNTSLAKINSFWFAATLLLGRNVNCVRAIFILFXSSP 750
++ K LT F+ C+P + T A +F+F LLLG ++ V ++ +F P
Sbjct: 145 LFYLKKLTLFST---CSPAARTFRASAANFFFPLVLLLGLAISSVPLLYSIFLIPP 197
>BC025323-1|AAH25323.1| 706|Homo sapiens transmembrane channel-like
4 protein.
Length = 706
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 583 MYLSKALTSFTATAHCAPISNTSLAKINSFWFAATLLLGRNVNCVRAIFILFXSSP 750
++ K LT F+ C+P + T A +F+F LLLG ++ V ++ +F P
Sbjct: 557 LFYLKKLTLFST---CSPAARTFRASAANFFFPLVLLLGLAISSVPLLYSIFLIPP 609
>AY236492-1|AAP69870.1| 712|Homo sapiens transmembrane channel-like
protein 4 protein.
Length = 712
Score = 31.5 bits (68), Expect = 3.4
Identities = 17/56 (30%), Positives = 29/56 (51%)
Frame = +1
Query: 583 MYLSKALTSFTATAHCAPISNTSLAKINSFWFAATLLLGRNVNCVRAIFILFXSSP 750
++ K LT F+ C+P + T A +F+F LLLG ++ V ++ +F P
Sbjct: 563 LFYLKKLTLFST---CSPAARTFRASAANFFFPLVLLLGLAISSVPLLYSIFLIPP 615
>AY263166-1|AAP78781.1| 706|Homo sapiens TMC4 protein protein.
Length = 706
Score = 30.7 bits (66), Expect = 6.0
Identities = 15/50 (30%), Positives = 25/50 (50%)
Frame = +1
Query: 601 LTSFTATAHCAPISNTSLAKINSFWFAATLLLGRNVNCVRAIFILFXSSP 750
L T + C+P + T A +F+F LLLG ++ V ++ +F P
Sbjct: 560 LKKVTLFSTCSPAARTFRASAANFFFPLVLLLGLAISSVPLLYSIFLIPP 609
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 109,609,116
Number of Sequences: 237096
Number of extensions: 2165659
Number of successful extensions: 4101
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 3976
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4096
length of database: 76,859,062
effective HSP length: 89
effective length of database: 55,757,518
effective search space used: 9199990470
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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