Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_B23
         (764 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical pr...   117   8e-27
U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical p...    31   1.2  
Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical pr...    28   6.3  
Z67755-5|CAA91758.2|  966|Caenorhabditis elegans Hypothetical pr...    28   6.3  
AF200199-1|AAF13716.1|  966|Caenorhabditis elegans MES-1 protein.      28   6.3  
U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical pr...    28   8.4  
AF016439-5|AAB65900.1|  630|Caenorhabditis elegans Hypothetical ...    28   8.4  

>Z69904-5|CAA93778.1|  250|Caenorhabditis elegans Hypothetical
           protein ZK20.5 protein.
          Length = 250

 Score =  117 bits (282), Expect = 8e-27
 Identities = 74/235 (31%), Positives = 126/235 (53%), Gaps = 2/235 (0%)
 Frame = -1

Query: 731 IKIALTQLTFLPSNNVAANQKELILA-RDVLEIGAQWAVAVKDVKAFERYMSQLKCYYFD 555
           ++ AL +LT + S +   N K+  LA +D+ EI    A+   D + F+ Y++Q+  YY  
Sbjct: 22  VEKALNELTKVLSASSDLNDKQSALASKDLYEISVLLAILKHDFETFDDYINQMHTYY-- 79

Query: 554 YKDHLPESAFTNQXXXXXXXXXL-SQNRVAEFHTELERLPVDVIRTDLYIRHPLALEQYL 378
                PE++             L + NR+++FH  LE++P     ++ YI  P+ +EQ L
Sbjct: 80  --TMAPENSENKHLMTGLHLMFLLAANRLSDFHMLLEQIPQKEQTSNAYISTPVRIEQSL 137

Query: 377 MEGSYNKIFLAKGNVPAESYTFFMDTLLETVRGEIAACIEKAYHTIPCAEAARRLNLSSQ 198
           MEG+YNK+ L + N+P+  YT F+  +L+T+R EIA  IEK++  +   +A   L   + 
Sbjct: 138 MEGAYNKVVLTEKNIPSPFYTIFIRIMLDTIRREIATSIEKSFKVLTAKDATVMLLFDND 197

Query: 197 QAVLEYGKKRNWRLGPDNCYRFTSEELTSVAFSGILPSAELAQQTIEDARQLEMI 33
           + + ++G++R W L  +  Y F  E       +  L +  +A QT+  A+QLE I
Sbjct: 198 EQMKKFGQERKWHLDGER-YVFEIEVAQEKPVN--LDTVRVATQTLFYAKQLEQI 249


>U53336-10|AAA96182.2|  125|Caenorhabditis elegans Hypothetical
           protein K07C11.10 protein.
          Length = 125

 Score = 30.7 bits (66), Expect = 1.2
 Identities = 17/64 (26%), Positives = 30/64 (46%), Gaps = 1/64 (1%)
 Frame = -1

Query: 224 ARRLNLSSQQAVLEYGKKRNWRLGPDNCYRFTSEELTSV-AFSGILPSAELAQQTIEDAR 48
           A   N   ++ V+  G+K   +L  D CY F  E LT +     ++P   +  Q +E  +
Sbjct: 19  ATEKNEKQERVVMSQGEKLEEKLFVDECYLFQDETLTPIFCKPKLIPLKTITTQKLEKMQ 78

Query: 47  QLEM 36
           + +M
Sbjct: 79  REQM 82


>Z81587-1|CAB04701.1|  340|Caenorhabditis elegans Hypothetical
           protein T06G6.1 protein.
          Length = 340

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 19/51 (37%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +1

Query: 589 LSKALTSFTATAHCAPISNTSLAKINSFWFAATLLLGRNV--NCVRAIFIL 735
           L+ ALTS T   +CA IS   L      W A   L   N+  N  R I I+
Sbjct: 19  LASALTSVTLKFNCAFISTIVLISYCFSWLAIQALWNNNIFSNSTRLILIV 69


>Z67755-5|CAA91758.2|  966|Caenorhabditis elegans Hypothetical
           protein F54F7.5 protein.
          Length = 966

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 749 GELLNKIKIALTQLTFLPSNNVAANQKELI 660
           G +LN + I     +F+PSNN A + K L+
Sbjct: 107 GTVLNDVFIVCLDTSFMPSNNSAPSAKRLL 136


>AF200199-1|AAF13716.1|  966|Caenorhabditis elegans MES-1 protein.
          Length = 966

 Score = 28.3 bits (60), Expect = 6.3
 Identities = 12/30 (40%), Positives = 18/30 (60%)
 Frame = -1

Query: 749 GELLNKIKIALTQLTFLPSNNVAANQKELI 660
           G +LN + I     +F+PSNN A + K L+
Sbjct: 107 GTVLNDVFIVCLDTSFMPSNNSAPSAKRLL 136


>U39852-1|AAK39256.2| 2314|Caenorhabditis elegans Hypothetical protein
            K10C2.1 protein.
          Length = 2314

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 15/33 (45%), Positives = 18/33 (54%), Gaps = 1/33 (3%)
 Frame = -3

Query: 546  PPPGVCIHKPTVRIESIIPAFSKP-SGRVSHRT 451
            PPP V    PT  I +++P  S P SG VS  T
Sbjct: 2205 PPPSVATAGPTGPILTVVPVSSAPTSGAVSSTT 2237


>AF016439-5|AAB65900.1|  630|Caenorhabditis elegans Hypothetical
           protein R02F11.4 protein.
          Length = 630

 Score = 27.9 bits (59), Expect = 8.4
 Identities = 31/154 (20%), Positives = 66/154 (42%), Gaps = 4/154 (2%)
 Frame = -1

Query: 485 SQNRVAEFHTELERL-PVDVIRTDLYIRHPLALEQYLMEGSYNKI--FLAKGNVPAESYT 315
           + N++++  T  + + P ++   D+       L Q+ +  ++ K+  F+  GN    S T
Sbjct: 193 ADNKISDLTTITKLICPTNLKNLDISSNSIEDLSQFSVLSTFKKLEEFVVAGN---PSIT 249

Query: 314 FFMDTLLETVRGEIAACIEKAYHTIPCAEAARRLNLSSQQAVLEYGKKRNWRLGPDNCYR 135
             +D+ L   R  I AC  +  HTI   +   ++    +   L+   K   ++GP N   
Sbjct: 250 SVLDSDLFDYRSYIFACCSEQLHTIDGQKIEDQVQTEGEWLALQGSIK---KIGPGNHDA 306

Query: 134 FTSEELTSVAFSG-ILPSAELAQQTIEDARQLEM 36
              +  +    SG   P+ +   + +E  R +++
Sbjct: 307 LCQQIASHFPDSGPPTPAQKSCHKALEKRRSMKV 340


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,323,462
Number of Sequences: 27780
Number of extensions: 352724
Number of successful extensions: 852
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 831
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 852
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1830096852
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)