BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fcaL-P13_pT_B16
(553 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein prot... 26 0.95
DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist mic... 23 5.0
AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein. 23 6.7
AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein. 23 6.7
AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein. 23 6.7
AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein. 23 6.7
AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein. 23 6.7
AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein. 23 6.7
AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein. 23 6.7
AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein. 23 6.7
AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbona... 23 6.7
AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical prot... 23 6.7
AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein ... 23 8.8
AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinestera... 23 8.8
AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinestera... 23 8.8
AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinestera... 23 8.8
>AJ010903-1|CAA09389.1| 373|Anopheles gambiae ICHIT protein
protein.
Length = 373
Score = 25.8 bits (54), Expect = 0.95
Identities = 11/27 (40%), Positives = 14/27 (51%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P TG +P+
Sbjct: 272 PPTTSEPPSTPHPTDPHCPPTGATLPN 298
>DQ383732-1|ABD47743.1| 201|Anopheles gambiae IAP-antagonist
michelob_x protein.
Length = 201
Score = 23.4 bits (48), Expect = 5.0
Identities = 9/20 (45%), Positives = 11/20 (55%)
Frame = -3
Query: 476 PSTPSRVYPPRSATGTAIPS 417
P P+ PP + T T IPS
Sbjct: 82 PQPPAASMPPSTTTNTQIPS 101
>AY753541-1|AAV28544.1| 3398|Anopheles gambiae SGS4 protein.
Length = 3398
Score = 23.0 bits (47), Expect = 6.7
Identities = 8/12 (66%), Positives = 9/12 (75%)
Frame = -2
Query: 276 WNGRPFNLFPKT 241
WNG+ FNLF T
Sbjct: 1617 WNGQEFNLFCST 1628
>AY344835-1|AAR05806.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P G +P+
Sbjct: 272 PPTTNEPPSTPHPTDPHCPPPGATLPN 298
>AY344834-1|AAR05805.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P G +P+
Sbjct: 272 PPTTNEPPSTPHPTDPHCPPPGATLPN 298
>AY344833-1|AAR05804.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P G +P+
Sbjct: 272 PPTTNEPPSTPHPTDPHCPPPGATLPN 298
>AY344832-1|AAR05803.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P G +P+
Sbjct: 271 PPTTNEPPSTPHPTDPHCPPPGATLPN 297
>AY344831-1|AAR05802.1| 333|Anopheles gambiae ICHIT protein.
Length = 333
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P G +P+
Sbjct: 271 PPTTNEPPSTPHPTDPHCPPPGATLPN 297
>AY344830-1|AAR05801.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P G +P+
Sbjct: 272 PPTTNEPPSTPHPTDPHCPPPGATLPN 298
>AY344829-1|AAR05800.1| 334|Anopheles gambiae ICHIT protein.
Length = 334
Score = 23.0 bits (47), Expect = 6.7
Identities = 10/27 (37%), Positives = 13/27 (48%)
Frame = -3
Query: 497 PPRTWDEPSTPSRVYPPRSATGTAIPS 417
PP T + PSTP P G +P+
Sbjct: 272 PPTTNEPPSTPHPTDPHCPPPGATLPN 298
>AY280611-1|AAQ21364.1| 1102|Anopheles gambiae chloride/bicarbonate
anion exchanger protein.
Length = 1102
Score = 23.0 bits (47), Expect = 6.7
Identities = 8/14 (57%), Positives = 10/14 (71%)
Frame = -1
Query: 487 PGTSRRHLQESTHR 446
PG+SRRH Q H+
Sbjct: 43 PGSSRRHSQRRRHK 56
>AJ439060-18|CAD27769.1| 257|Anopheles gambiae hypothetical protein
protein.
Length = 257
Score = 23.0 bits (47), Expect = 6.7
Identities = 12/33 (36%), Positives = 14/33 (42%)
Frame = -1
Query: 496 RRGPGTSRRHLQESTHRDLPLVQQFRRVIEYVS 398
R P +H Q P +QFR V YVS
Sbjct: 63 RMPPVPPPKHSQRRRRSSSPRTRQFRSVCYYVS 95
>AY263177-1|AAP78792.1| 699|Anopheles gambiae TmcC-like protein
protein.
Length = 699
Score = 22.6 bits (46), Expect = 8.8
Identities = 13/50 (26%), Positives = 22/50 (44%)
Frame = -3
Query: 548 PPPXACRRNTSCTRWPCPPRTWDEPSTPSRVYPPRSATGTAIPSCDRIRE 399
PPP A ++ P + + S P+ PPR+ + S DR ++
Sbjct: 629 PPPSAYQQQQPPVVPPPRTNSQSQASEPTPALPPRADRDSKPSSRDRPKD 678
>AJ515150-1|CAD56157.2| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 22.6 bits (46), Expect = 8.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -1
Query: 550 RLLXPRAEGIQAVHAGRARRGPGTSRRHLQESTHRDLPLV 431
R++ ++ VH+G R G +RR + + PLV
Sbjct: 128 RIIDAELGTLEHVHSGATPRRRGLTRRESNSDANDNDPLV 167
>AJ515149-1|CAD56156.1| 737|Anopheles gambiae acetylcholinesterase
protein.
Length = 737
Score = 22.6 bits (46), Expect = 8.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -1
Query: 550 RLLXPRAEGIQAVHAGRARRGPGTSRRHLQESTHRDLPLV 431
R++ ++ VH+G R G +RR + + PLV
Sbjct: 128 RIIDAELGTLEHVHSGATPRRRGLTRRESNSDANDNDPLV 167
>AJ488492-1|CAD32684.2| 623|Anopheles gambiae acetylcholinesterase
protein.
Length = 623
Score = 22.6 bits (46), Expect = 8.8
Identities = 11/40 (27%), Positives = 19/40 (47%)
Frame = -1
Query: 550 RLLXPRAEGIQAVHAGRARRGPGTSRRHLQESTHRDLPLV 431
R++ ++ VH+G R G +RR + + PLV
Sbjct: 14 RIIDAELGTLEHVHSGATPRRRGLTRRESNSDANDNDPLV 53
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 494,022
Number of Sequences: 2352
Number of extensions: 8555
Number of successful extensions: 25
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 25
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 25
length of database: 563,979
effective HSP length: 61
effective length of database: 420,507
effective search space used: 51301854
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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