Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fcaL-P13_pT_B11
         (700 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_0783 - 24546403-24546765,24547202-24547262,24547899-245480...    30   1.5  
03_01_0106 - 839585-839614,839725-840825,840901-841122                 30   1.5  
01_06_1142 + 34856497-34856698,34857852-34858402                       29   2.7  
10_01_0284 + 2969965-2970136,2970240-2970703                           29   3.5  
12_01_0350 + 2682502-2682593,2684131-2684327,2684978-2685162,268...    29   4.7  
12_01_0348 - 2662510-2662565,2662634-2662943,2663573-2663734,266...    29   4.7  
03_05_0977 + 29355824-29357056                                         28   6.2  
12_01_0754 - 6816789-6816886,6816922-6817722,6818377-6819058           28   8.2  

>06_03_0783 -
           24546403-24546765,24547202-24547262,24547899-24548004,
           24548118-24551600,24553134-24553179
          Length = 1352

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 14/68 (20%), Positives = 32/68 (47%)
 Frame = +3

Query: 447 CNCENRYIRFILVFTGRYMFCDYICCTSGFVSK*FLEELTTLQHFI*RVMFCCTLHHFVH 626
           C C+ + +R ++++     FC  +C  + F  +   + L  L      +     L+H +H
Sbjct: 594 CTCKLQRLRTLIIWNKDRCFCPRVCVEANFFKE--FKSLRLLDLTGCCLRHSPDLNHMIH 651

Query: 627 VVCILITY 650
           + C+++ Y
Sbjct: 652 LRCLILPY 659


>03_01_0106 - 839585-839614,839725-840825,840901-841122
          Length = 450

 Score = 30.3 bits (65), Expect = 1.5
 Identities = 16/47 (34%), Positives = 24/47 (51%)
 Frame = -3

Query: 644 DENTDNMNEMMKSTTEHDPLDKMLECCEFFKKLFGNKTTGTTNVIAE 504
           + +T   N M+KS       DKM+   ++ KK F + T  T N+I E
Sbjct: 264 EPDTQTFNIMIKSYGNAKMHDKMMSVLKYMKKHFFSPTVVTFNIIIE 310


>01_06_1142 + 34856497-34856698,34857852-34858402
          Length = 250

 Score = 29.5 bits (63), Expect = 2.7
 Identities = 11/30 (36%), Positives = 20/30 (66%)
 Frame = -3

Query: 662 QNYNVRDENTDNMNEMMKSTTEHDPLDKML 573
           QN  +RD N++ ++EM    TEH+ + +M+
Sbjct: 184 QNIAMRDHNSERISEMHHFDTEHEQIRRMM 213


>10_01_0284 + 2969965-2970136,2970240-2970703
          Length = 211

 Score = 29.1 bits (62), Expect = 3.5
 Identities = 10/22 (45%), Positives = 12/22 (54%)
 Frame = +2

Query: 635 YSHHVRCNSVYYCQLXDWFHLR 700
           YS    CNS + C   D+FH R
Sbjct: 149 YSSSAECNSAFLCPFFDYFHKR 170


>12_01_0350 +
           2682502-2682593,2684131-2684327,2684978-2685162,
           2685253-2685453,2685834-2685995,2686421-2686741
          Length = 385

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = -3

Query: 488 EHENESNIPVFAITLACLLAVGSMLFVFVACHKLSEI 378
           +H   ++I +F +TL+C++A+G  L  F+   + S +
Sbjct: 270 DHFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAV 306


>12_01_0348 -
           2662510-2662565,2662634-2662943,2663573-2663734,
           2664072-2664272,2664357-2664541,2665108-2665240
          Length = 348

 Score = 28.7 bits (61), Expect = 4.7
 Identities = 11/37 (29%), Positives = 23/37 (62%)
 Frame = -3

Query: 488 EHENESNIPVFAITLACLLAVGSMLFVFVACHKLSEI 378
           +H   ++I +F +TL+C++A+G  L  F+   + S +
Sbjct: 218 DHFGFTSIALFFLTLSCVIAIGVNLSQFICIGRFSAV 254


>03_05_0977 + 29355824-29357056
          Length = 410

 Score = 28.3 bits (60), Expect = 6.2
 Identities = 13/38 (34%), Positives = 20/38 (52%), Gaps = 1/38 (2%)
 Frame = -3

Query: 689 TNQXIDSSTQNYNVRDENTDNMNEMMK-STTEHDPLDK 579
           T    DSST +  + DE  + M + MK    + DP+D+
Sbjct: 74  TKLEADSSTLDERIEDEENEEMEQEMKHDENDEDPIDE 111


>12_01_0754 - 6816789-6816886,6816922-6817722,6818377-6819058
          Length = 526

 Score = 27.9 bits (59), Expect = 8.2
 Identities = 14/49 (28%), Positives = 23/49 (46%)
 Frame = -3

Query: 674 DSSTQNYNVRDENTDNMNEMMKSTTEHDPLDKMLECCEFFKKLFGNKTT 528
           D S +   +  + T ++ +     TE  P  K+    +F+KK F  KTT
Sbjct: 203 DVSNKIAAMGSDGTASLRQNFLGETEISPTQKLETMNDFYKKYFNTKTT 251


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,475,485
Number of Sequences: 37544
Number of extensions: 340960
Number of successful extensions: 727
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 713
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 726
length of database: 14,793,348
effective HSP length: 80
effective length of database: 11,789,828
effective search space used: 1792053856
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)